RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 TSPAN17Q96FV3 270 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 OXNAD1Q96HP4 312 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 SPATA13Q96N96 652 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 WDFY2Q96P53 400 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 SMIM14Q96QK8 99 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 FCRL5Q96RD9 977 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 NR1H4Q96RI1 486 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 PIP5K1AQ99755 562 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 TXN2Q99757 166 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 APOL2Q9BQE5 337 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 SLC39A3Q9BRY0 314 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 NAA11Q9BSU3 229 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 EDEM2Q9BV94 578 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 FICDQ9BVA6 458 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 TDRD1Q9BXT4 1180 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 GBA3Q9H227 469 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 NCOR1P1Q9H4R4 102 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 GAREM1Q9H706 876 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 USP29Q9HBJ7 922 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 ZNF304Q9HCX3 659 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PARD6AQ9NPB6 346 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 TCF7L2Q9NQB0 619 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 MBNL1Q9NR56 388 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 PLA2G3Q9NZ20 509 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 EXTL2Q9UBQ6 330 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 CD84Q9UIB8 345 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 GPR160Q9UJ42 338 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 SHOC2Q9UQ13 582 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 KCNK7Q9Y2U2 307 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 AAR2Q9Y312 384 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 PTRH2Q9Y3E5 179 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 SAR1BQ9Y6B6 198 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 V9GYY5 206 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 VPS13AQ96RL7 3174 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 CACNA1IQ9P0X4 2223 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 MIA3Q5JRA6 1907 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 ATG2BQ96BY7 2078 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 A0A0J9YYE9 177 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 C1orf232A0A0U1RR37 186 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 LNP1A1A4G5 178 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 LIPT2A6NK58 231 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 OR6C76A6NM76 312 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 C4orf47A7E2U8 309 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 GPR89AB7ZAQ6 455 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 RAB27BO00194 218 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PSMD3O43242 534 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 BUD23O43709 281 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 MAGEC1O60732 1142 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 USP12O75317 370 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 RASSF9O75901 435 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 HEXIM1O94992 359 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 TRIM16O95361 564 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PTBP3O95758 552 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 CER1O95813 267 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 TRBC1P01850 177 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 GPR89BP0CG08 455 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 GAAP10253 952 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 ETS1P14921 441 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 TPH1P17752 444 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 LHCGRP22888 699 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 RPL22P35268 128 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 TAGLN2P37802 199 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 ACAA2P42765 397 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 KCNJ5P48544 419 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PITPNBP48739 271 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 VPS41P49754 854 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 NPY4RP50391 375 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 THOP1P52888 689 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 ALDH18A1P54886 795 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 RPL26P61254 145 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 BASP1P80723 227 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 IL9RQ01113 521 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 ROM1Q03395 351 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 TLE1Q04724 770 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 RALGDSQ12967 914 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 GRIK2Q13002 908 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 OLIG2Q13516 323 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 TRA2AQ13595 282 aaKnown RBP eCLIP2.69□□□□□ -1.98
SKP1-204ENST00000517691 HABP2Q14520 560 aaPredicted RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 PCLAFQ15004 111 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 MORF4L2Q15014 288 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 IRF4Q15306 451 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 SLC1A5Q15758 541 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 CNGA3Q16281 694 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 TYSND1Q2T9J0 566 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 HLA-BQ31612 363 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 P3H1Q32P28 736 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 ZNF542PQ5EBM4 170 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 SIRPB2Q5JXA9 342 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PAPD7Q5XG87 772 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 LRRC66Q68CR7 880 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 RAET1GQ6H3X3 334 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 CCDC137Q6PK04 289 aaKnown RBP2.69□□□□□ -1.98
SKP1-204ENST00000517691 TEPPQ6URK8 271 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 ZYG11AQ6WRX3 759 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 RPTNQ6XPR3 784 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 PPP1R21Q6ZMI0 780 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 KDM7AQ6ZMT4 941 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 RFLNAQ6ZTI6 216 aa2.69□□□□□ -1.98
SKP1-204ENST00000517691 Q6ZVL8 140 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms