RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 KCND3Q9UK17 655 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 MTUS1Q9ULD2 1270 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 PNMA8BQ9ULN7 279 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 DAPP1Q9UN19 280 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 DUSP12Q9UNI6 340 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 TMEM184BQ9Y519 407 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 SPIN1Q9Y657 262 aaPredicted RBP-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 STRCP1A6NGW2 1772 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 MYO9BQ13459 2157 aa-1.24□□□□□ -2.61
RNU6-542P-201ENST00000516405 NACADO15069 1562 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 A0A0A6YYC8 382 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 TEX48A0A1B0GUV7 120 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 EIF4E1BA6NMX2 242 aaKnown RBP-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 FOXI3A8MTJ6 420 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 A8MUU9 505 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 EFCAB8A8MWE9 144 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 I3L1I5 382 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 GAPDHSO14556 408 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 FPGTO14772 594 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 BET1O15155 118 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 GPAA1O43292 621 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 DUSP14O95147 198 aaKnown RBP-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 OR6A2O95222 327 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 TFP02787 698 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 PCCAP05165 728 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 CCNCP24863 283 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 CNGA1P29973 690 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 HOXC9P31274 260 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 CTRLP40313 264 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 GPD2P43304 727 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 GUCY2FP51841 1108 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 CX3CL1P78423 397 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 ACVR1Q04771 509 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 TAF11Q15544 211 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 RAB30Q15771 203 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 ALDH1L2Q3SY69 923 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 KRTAP19-7Q3SYF9 63 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 PHLDA2Q53GA4 152 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 ZNF789Q5FWF6 425 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 LIN54Q6MZP7 749 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 C2orf66Q6UXQ4 117 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 LINGO4Q6UY18 593 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 CCDC117Q8IWD4 279 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 OR13J1Q8NGT2 312 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 HM13Q8TCT9 377 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 HTRA1Q92743 480 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 TMEM159Q96B96 161 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 TBC1D20Q96BZ9 403 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 NABP2Q9BQ15 211 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 ABHD6Q9BV23 337 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 DENND2DQ9H6A0 471 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 ZNF442Q9H7R0 627 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 PIGVQ9NUD9 493 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 PRMT7Q9NVM4 692 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 DPP3Q9NY33 737 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 DHCR7Q9UBM7 475 aaKnown RBP-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 CACNG4Q9UBN1 327 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 HSF4Q9ULV5 492 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 SATB2Q9UPW6 733 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 YTHDF2Q9Y5A9 579 aaKnown RBP-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 MRPL42Q9Y6G3 142 aaKnown RBP-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 ZNF462Q96JM2 2506 aa-1.25□□□□□ -2.61
RNU6-542P-201ENST00000516405 FRMD3A2A2Y4 597 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 A6NDX4 124 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 TMEM189-UBE2V1I3L0A0 370 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 J3QR06 171 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 PIP5K1BO14986 540 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 CD4P01730 458 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 ZNF806P0C7X5 589 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 PRKAR1AP10644 381 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 RCC1P18754 421 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 SERPINA4P29622 427 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 SPRP35270 261 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 ERFP50548 548 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 GZMMP51124 257 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 UBE2V1Q13404 147 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 PDE7AQ13946 482 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 PDE1CQ14123 709 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 KNOP1Q1ED39 458 aaKnown RBP-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 DEFB116Q30KQ4 102 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 SBK1Q52WX2 424 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 ARL6IP4Q66PJ3 421 aaKnown RBP-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 GCNT7Q6ZNI0 430 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 ZSCAN30Q86W11 494 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 DEFB119Q8N690 84 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 Q8N9W7 124 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 FSIP1Q8NA03 581 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 SLC37A3Q8NCC5 494 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 LINS1Q8NG48 757 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 OR8K5Q8NH50 307 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 RNF128Q8TEB7 428 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 CNOT9Q92600 299 aaKnown RBP-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 MARC2Q969Z3 335 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 RBM17Q96I25 401 aaKnown RBP-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 LRGUKQ96M69 825 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 DOK1Q99704 481 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 FAM173AQ9BQD7 235 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 DNAI2Q9GZS0 605 aa-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 FAM49AQ9H0Q0 323 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-542P-201ENST00000516405 SIL1Q9H173 461 aa-1.26□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms