RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 CCR5P51681 352 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 TPD52P55327 224 aaPredicted RBP-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 PAX2Q02962 417 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 OVGP1Q12889 678 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 SRSF5Q13243 272 aaKnown RBP-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 CRMP1Q14194 572 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 MELKQ14680 651 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 PCK2Q16822 640 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 KNOP1Q1ED39 458 aaKnown RBP-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 PRR9Q5T870 116 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 ATG16L1Q676U5 607 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 MCM10Q7L590 875 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 APOBEC3FQ8IUX4 373 aaKnown RBP-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 SAXO1Q8IYX7 474 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 CEP57L1Q8IYX8 460 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 CERS5Q8N5B7 392 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 ARIH2OSQ8N7S6 290 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 OR9Q2Q8NGE9 314 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 RPLP0P6Q8NHW5 317 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 FBXO30Q8TB52 745 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 FAM20AQ96MK3 541 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 DACH2Q96NX9 599 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 NUDCD1Q96RS6 583 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 NANOGQ9H9S0 305 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 DEPPQ9NTK1 212 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 PPP1R14DQ9NXH3 145 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 KCND2Q9NZV8 630 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 KLK11Q9UBX7 282 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 LRCH1Q9Y2L9 728 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 IL16Q14005 1332 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 FSIP2Q5CZC0 6907 aa-0.19□□□□□ -2.44
SCARNA23-201ENST00000516060 IGLV2-18A0A075B6J9 118 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 A0A1B0GUA9 196 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 TEX48A0A1B0GUV7 120 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 ZSCAN5BA6NJL1 495 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 FOXI3A8MTJ6 420 aaPredicted RBP-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 O00370 1275 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 SAP18O00422 153 aaKnown RBP-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 OGG1O15527 345 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 LRRTM2O43300 516 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 TNFSF12O43508 249 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 HCRTR2O43614 444 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 ICOSLGO75144 302 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 TGDSO95455 350 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 PRB1P04280 392 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 PGAM2P15259 253 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 CD1DP15813 335 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 MAGP20916 626 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 JAK1P23458 1154 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 RPA1P27694 616 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 PSMC2P35998 433 aaKnown RBP-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 ADARP55265 1226 aaKnown RBP-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 LMOD3Q0VAK6 560 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 NEXNQ0ZGT2 675 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 PRICKLE4Q2TBC4 344 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 ADCK5Q3MIX3 580 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 GPR33Q49SQ1 333 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 NHSL2Q5HYW2 709 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 TMEM198Q66K66 360 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 CPEB2Q7Z5Q1 589 aaKnown RBP-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 ZNF677Q86XU0 584 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 RELL2Q8NC24 303 aaPredicted RBP-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 OR1B1Q8NGR6 318 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 MOSPD2Q8NHP6 518 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 JDP2Q8WYK2 163 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 SGCDQ92629 289 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 ZBTB10Q96DT7 871 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 ZNF641Q96N77 438 aaPredicted RBP-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 OR6C1Q96RD1 312 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 CCDC3Q9BQI4 270 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 FUZQ9BT04 418 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 FAM167BQ9BTA0 163 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 NMUR2Q9GZQ4 415 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 WDR41Q9HAD4 459 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 ARMCX3Q9UH62 379 aaPredicted RBP-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 KLHL21Q9UJP4 597 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 CA5BQ9Y2D0 317 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 PRG3Q9Y2Y8 225 aaPredicted RBP-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 CPQQ9Y646 472 aa-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 PRRC2BQ5JSZ5 2229 aaKnown RBP-0.2□□□□□ -2.44
SCARNA23-201ENST00000516060 CHD4Q14839 1912 aa-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 hCG_2014768A0A024R1R8 64 aa-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 HEPACAM2A8MVW5 462 aa-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 FOXE1O00358 373 aaPredicted RBP-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 SSX4O60224 188 aa-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 OR10H2O60403 315 aa-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 PAGE4O60829 102 aa-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 GPX5O75715 221 aa-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 RBBP9O75884 186 aa-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 IGHG3P01860 377 aa-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 NUDT1P36639 197 aa-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 CTCFP49711 727 aaPredicted RBP-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 P2RY4P51582 365 aa-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 TFAP4Q01664 338 aa-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 SLC12A1Q13621 1099 aa-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 EIF4A2Q14240 407 aaKnown RBP-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 HERPUD1Q15011 391 aa-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 ABRAXAS2Q15018 415 aa-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 POSTNQ15063 836 aa-0.21□□□□□ -2.44
SCARNA23-201ENST00000516060 CA9Q16790 459 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms