RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 EMP3P54852 163 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 INHBCP55103 352 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 SIM1P81133 766 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 GUCY1A3Q02108 690 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 SLBPQ14493 270 aaKnown RBP eCLIP11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 ISXQ2M1V0 245 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 UGT3A2Q3SY77 523 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 TMTC4Q5T4D3 741 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 KANK2Q63ZY3 851 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 MED27Q6P2C8 311 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 CYB5D1Q6P9G0 228 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 BPHLQ86WA6 291 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 TMPRSS12Q86WS5 348 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 FAM20CQ8IXL6 584 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 CLYBLQ8N0X4 340 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 MFSD9Q8NBP5 474 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 OR7G3Q8NG95 312 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 OR8K5Q8NH50 307 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 ADAMTS14Q8WXS8 1223 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 USP7Q93009 1102 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 TM4SF19Q96DZ7 209 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 FAR2Q96K12 515 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 DEPDC7Q96QD5 511 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 TNFRSF12AQ9NP84 129 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 ACSS2Q9NR19 701 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 SIDT1Q9NXL6 827 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 ZFP69BQ9UJL9 534 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 SNX6Q9UNH7 406 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 PLCL2Q9UPR0 1127 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 TRAF6Q9Y4K3 522 aa11.47□□□□□ -0.57
PDLIM5-220ENST00000514830 SPAARA0A1B0GVQ0 90 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 TMEM8BA6NDV4 472 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 SRRM3A6NNA2 597 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 NPIPB8E9PQR5 432 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 SLCO1B7G3V0H7 640 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 H3BMH7 237 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 TXNDC9O14530 226 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 CLEC3AO75596 197 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 LYPLA1O75608 230 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 KRT6AP02538 564 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 KRT6BP04259 564 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 CAPN1P07384 714 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 TSPAN8P19075 237 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 BCL6P41182 706 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 MLLT3P42568 568 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 KRT6CP48668 564 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 PPM1FP49593 454 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 ARFIP1P53367 373 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 EIF3IQ13347 325 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 PWP1Q13610 501 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 ZRSR2Q15696 482 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 KIF26BQ2KJY2 2108 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 FRG2Q64ET8 278 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 ADCK2Q7Z695 626 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 B3GNT8Q7Z7M8 397 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 BMPERQ8N8U9 685 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 ANKRD53Q8N9V6 530 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 AGBL5Q8NDL9 886 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 ZNF740Q8NDX6 193 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 TRPV3Q8NET8 790 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 METTL6Q8TCB7 284 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 STON2Q8WXE9 905 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 ZNF317Q96PQ6 595 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 CDK15Q96Q40 435 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 FRG2BQ96QU4 278 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 STRADBQ9C0K7 418 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 ZMYND15Q9H091 742 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 BRF2Q9HAW0 419 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 FAM60AQ9NP50 221 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 ZDHHC2Q9UIJ5 367 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 CLCA2Q9UQC9 943 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 KLHL20Q9Y2M5 609 aa11.46□□□□□ -0.57
PDLIM5-220ENST00000514830 FITM1A5D6W6 292 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 B4E171 279 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 MANBAO00462 879 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 LCMT2O60294 686 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 NRP2O60462 931 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 EDF1O60869 148 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 ULK1O75385 1050 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 TGDSO95455 350 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 SERPINA6P08185 405 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 MPSTP25325 297 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 HMOX2P30519 316 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 TSPAN7P41732 249 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 FOXA1P55317 472 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 PHEXP78562 749 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 ACY1Q03154 408 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 CSTF3Q12996 717 aaKnown RBP11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 IFT88Q13099 833 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 IL11RAQ14626 422 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 C16orf72Q14CZ0 275 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 CPSF6Q16630 551 aaKnown RBP eCLIP11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 ADPRMQ3LIE5 342 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 TCTE1Q5JU00 501 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 SH2D4BQ5SQS7 431 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 PHF19Q5T6S3 580 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 HES3Q5TGS1 186 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 DHRS13Q6UX07 377 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 TRIM46Q7Z4K8 759 aa11.45□□□□□ -0.58
PDLIM5-220ENST00000514830 VN1R4Q7Z5H5 301 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms