RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 C5orf24Q7Z6I8 188 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 HOOK3Q86VS8 718 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 LSMEM2Q8N112 164 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 ADAD2Q8NCV1 583 aaKnown RBP4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 FIBINQ8TAL6 211 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 GDAP1Q8TB36 358 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 MRGPRDQ8TDS7 321 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 FAM218AQ96MZ4 157 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 BTBD9Q96Q07 612 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 ALDH8A1Q9H2A2 487 aaPredicted RBP4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 COPS7BQ9H9Q2 264 aaPredicted RBP4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 IARS2Q9NSE4 1012 aaKnown RBP4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 NOCTQ9UK39 431 aaKnown RBP4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 PRDM4Q9UKN5 801 aa4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 NOL7Q9UMY1 257 aaKnown RBP4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 RUVBL2Q9Y230 463 aaKnown RBP4.46□□□□□ -1.7
HMGCS1-207ENST00000514610 ARID2Q68CP9 1835 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 A0A0U1RQK1 487 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 ZNF320A2RRD8 509 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 OOEPA6NGQ2 149 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 PSMA7O14818 248 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 KRT86O43790 486 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 MOCS2O96007 188 aaPredicted RBP4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 SP100P23497 879 aaPredicted RBP4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 OPRL1P41146 370 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 PAX9P55771 341 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 XGP55808 180 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 YWHAHQ04917 246 aaPredicted RBP4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 TRA2AQ13595 282 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 KRT81Q14533 505 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 TMEM132DQ14C87 1099 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 PTPN14Q15678 1187 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 CCDC6Q16204 474 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 ANKRD20A4Q4UJ75 823 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 ANKRD20A8PQ5CZ79 823 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 ANKRD20A2Q5SQ80 823 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 ANKRD20A1Q5TYW2 823 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 ANKRD20A3Q5VUR7 823 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 FUT10Q6P4F1 479 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 GBP6Q6ZN66 633 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 MEX3DQ86XN8 651 aaKnown RBP4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 CROCCP3Q8IVE0 287 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 GBP7Q8N8V2 638 aaPredicted RBP4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 AMER3Q8N944 861 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 SLC26A7Q8TE54 656 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 SAP25Q8TEE9 199 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 ZNRF4Q8WWF5 429 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 ATP6V1E2Q96A05 226 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 MAGED4Q96JG8 741 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 C2orf48Q96LS8 159 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 NKX3-1Q99801 234 aaPredicted RBP4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 ASCL2Q99929 193 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 BARHL1Q9BZE3 327 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 RNF121Q9H920 327 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 TUFT1Q9NNX1 390 aa4.45□□□□□ -1.7
HMGCS1-207ENST00000514610 C15orf61A6NNL5 157 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 CTDSPLO15194 276 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 RPL35AP18077 110 aaKnown RBP4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 CYP2A7P20853 494 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 CCND3P30281 292 aaPredicted RBP4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 CTNNA1P35221 906 aaKnown RBP4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 SOAT1P35610 550 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 TCF7P36402 384 aaPredicted RBP4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 SOX3P41225 446 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 OR3A2P47893 321 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 CLDN17P56750 224 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 SRSF9Q13242 221 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 ADAM5Q6NVV9 412 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 CASC4Q6P4E1 433 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 FCRLAQ7L513 359 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 PRUNE1Q86TP1 453 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 GPC2Q8N158 579 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 FAM89BQ8N5H3 189 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 OR4C15Q8NGM1 316 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 ARHGAP45Q92619 1136 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 NEDD4LQ96PU5 975 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 ALKBH7Q9BT30 221 aaPredicted RBP4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 LSG1Q9H089 658 aaKnown RBP4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 C5orf66Q9H5L9 145 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 TBC1D13Q9NVG8 400 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 KLHL8Q9P2G9 620 aaPredicted RBP4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 IL36AQ9UHA7 158 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 PILRBQ9UKJ0 227 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 ELF5Q9UKW6 265 aaPredicted RBP4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 PPP1R3CQ9UQK1 317 aa4.44□□□□□ -1.7
HMGCS1-207ENST00000514610 TRAV18A0A075B6X5 111 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 A0A0B4J203 849 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 GLTPD2A6NH11 291 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 KBTBD13C9JR72 458 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 E5RGE8 158 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 STX6O43752 255 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 SP9P0CG40 484 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 EEF2P13639 858 aaKnown RBP4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 ELAVL4P26378 380 aaKnown RBP4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 RBMS1P29558 406 aaKnown RBP4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 SLC6A12P48065 614 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 DCDC1P59894 354 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 GUCY2DQ02846 1103 aa4.43□□□□□ -1.7
HMGCS1-207ENST00000514610 SLMAPQ14BN4 828 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms