RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 EIF2S1P05198 315 aaKnown RBP8.57□□□□□ -1.04
NUP54-211ENST00000512151 PRSS56P0CW18 603 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 C8orf89P0DMQ9 161 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 CD68P34810 354 aaPredicted RBP8.57□□□□□ -1.04
NUP54-211ENST00000512151 SLC26A3P40879 764 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 CDKN1CP49918 316 aaPredicted RBP8.57□□□□□ -1.04
NUP54-211ENST00000512151 LAPTM4AQ15012 233 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 BRD3Q15059 726 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 SLC25A35Q3KQZ1 300 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 KAZNQ674X7 775 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 SLC9A4Q6AI14 798 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 CPEB2Q7Z5Q1 589 aaKnown RBP8.57□□□□□ -1.04
NUP54-211ENST00000512151 WDR53Q7Z5U6 358 aaPredicted RBP8.57□□□□□ -1.04
NUP54-211ENST00000512151 VSIG1Q86XK7 387 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 RFX6Q8HWS3 928 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 P3H2Q8IVL5 708 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 CCDC50Q8IVM0 306 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 MAP7D3Q8IWC1 876 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 SULF2Q8IWU5 870 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 OR4K2Q8NGD2 314 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 OR5K2Q8NHB8 316 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 MRGPRX2Q96LB1 330 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 OSBPL9Q96SU4 736 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 NAPGQ99747 312 aaPredicted RBP8.57□□□□□ -1.04
NUP54-211ENST00000512151 OSBPL8Q9BZF1 889 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 VN1R1Q9GZP7 353 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 L2HGDHQ9H9P8 463 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 SMARCAL1Q9NZC9 954 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.57□□□□□ -1.04
NUP54-211ENST00000512151 POLG2Q9UHN1 485 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 CRLS1Q9UJA2 301 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 IGLV3-16A0A075B6K0 115 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 CCL22O00626 93 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 PHF1O43189 567 aaPredicted RBP8.56□□□□□ -1.04
NUP54-211ENST00000512151 KCNAB3O43448 404 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 FOXS1O43638 330 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 CST8O60676 142 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 PRMT3O60678 531 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 SRPX2O60687 465 aaPredicted RBP8.56□□□□□ -1.04
NUP54-211ENST00000512151 AP2A1O95782 977 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 PECAM1P16284 738 aaPredicted RBP8.56□□□□□ -1.04
NUP54-211ENST00000512151 TACR1P25103 407 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 ACVR2AP27037 513 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 PSMB5P28074 263 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 CASQ1P31415 396 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 PTPN7P35236 360 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 COPS2P61201 443 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 DYNLT1P63172 113 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 MAT1AQ00266 395 aaKnown RBP8.56□□□□□ -1.04
NUP54-211ENST00000512151 AP1B1Q10567 949 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 KLF1Q13351 362 aaPredicted RBP8.56□□□□□ -1.04
NUP54-211ENST00000512151 GRB7Q14451 532 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 SIX1Q15475 284 aaPredicted RBP8.56□□□□□ -1.04
NUP54-211ENST00000512151 MUM1Q2TAK8 710 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 FBXW10Q5XX13 1052 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 ARHGAP11AQ6P4F7 1023 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 ANKRD37Q7Z713 158 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 YTHDF3Q7Z739 585 aaKnown RBP8.56□□□□□ -1.04
NUP54-211ENST00000512151 LGI4Q8N135 537 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 RASGEF1CQ8N431 466 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 CLDN19Q8N6F1 224 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 RELL2Q8NC24 303 aaPredicted RBP8.56□□□□□ -1.04
NUP54-211ENST00000512151 ZNF592Q92610 1267 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 MMABQ96EY8 250 aaPredicted RBP8.56□□□□□ -1.04
NUP54-211ENST00000512151 OXNAD1Q96HP4 312 aaPredicted RBP8.56□□□□□ -1.04
NUP54-211ENST00000512151 CYTH2Q99418 400 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 COPS8Q99627 209 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 SH3GL2Q99962 352 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 PLCD4Q9BRC7 762 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 DEFB127Q9H1M4 99 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 CDCP1Q9H5V8 836 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 MKKSQ9NPJ1 570 aaPredicted RBP8.56□□□□□ -1.04
NUP54-211ENST00000512151 HACD3Q9P035 362 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 SAE1Q9UBE0 346 aaPredicted RBP8.56□□□□□ -1.04
NUP54-211ENST00000512151 VPS9D1Q9Y2B5 631 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 PRSS21Q9Y6M0 314 aa8.56□□□□□ -1.04
NUP54-211ENST00000512151 CTAGE9A4FU28 777 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 APOL1O14791 398 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 RRP9O43818 475 aaKnown RBP8.55□□□□□ -1.04
NUP54-211ENST00000512151 CEP104O60308 925 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 RALBP11234 206 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 NID1P14543 1247 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 PTPN3P26045 913 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 TPP2P29144 1249 aaPredicted RBP8.55□□□□□ -1.04
NUP54-211ENST00000512151 ITGA8P53708 1063 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 POU4F3Q15319 338 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 SLC1A5Q15758 541 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 KRTAP24-1Q3LI83 254 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 ODF2Q5BJF6 829 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 ZNF585AQ6P3V2 769 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 PODNL1Q6PEZ8 512 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 B3GNT6Q6ZMB0 384 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 BBS12Q6ZW61 710 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 RNF44Q7L0R7 432 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 SLC13A5Q86YT5 568 aaPredicted RBP8.55□□□□□ -1.04
NUP54-211ENST00000512151 CREG2Q8IUH2 290 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 KIF2BQ8N4N8 673 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 ARHGEF39Q8N4T4 335 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 HORMAD2Q8N7B1 307 aa8.55□□□□□ -1.04
NUP54-211ENST00000512151 POGLUT1Q8NBL1 392 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms