RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 HAUS8Q9BT25 410 aa11.97□□□□□ -0.49
KDM3B-206ENST00000509468 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.97□□□□□ -0.49
KDM3B-206ENST00000509468 SYNPO2LQ9H987 977 aa11.97□□□□□ -0.49
KDM3B-206ENST00000509468 ANKHQ9HCJ1 492 aa11.97□□□□□ -0.49
KDM3B-206ENST00000509468 OLAHQ9NV23 265 aa11.97□□□□□ -0.49
KDM3B-206ENST00000509468 STMN3Q9NZ72 180 aa11.97□□□□□ -0.49
KDM3B-206ENST00000509468 C19orf25Q9UFG5 118 aaPredicted RBP11.97□□□□□ -0.49
KDM3B-206ENST00000509468 ASIC3Q9UHC3 531 aa11.97□□□□□ -0.49
KDM3B-206ENST00000509468 SCN3AQ9NY46 2000 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 HIVEP3Q5T1R4 2406 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 A0A1B0GUH1 482 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 DNALI1O14645 258 aaPredicted RBP11.96□□□□□ -0.49
KDM3B-206ENST00000509468 P2RX6O15547 441 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 LRRTM2O43300 516 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 F7P08709 466 aaPredicted RBP11.96□□□□□ -0.49
KDM3B-206ENST00000509468 RNF224P0DH78 156 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 NPPBP16860 134 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 IL10P22301 178 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 BCL6P41182 706 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 TBPL1P62380 186 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 CSNK1G2P78368 415 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 MAT1AQ00266 395 aaKnown RBP11.96□□□□□ -0.49
KDM3B-206ENST00000509468 DHX9Q08211 1270 aaKnown RBP11.96□□□□□ -0.49
KDM3B-206ENST00000509468 NAE1Q13564 534 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 INAQ16352 499 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 SYT16Q17RD7 645 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 MFSD4BQ5TF39 518 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 DUPD1Q68J44 220 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 HIST2H2BCQ6DN03 193 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 CAPN13Q6MZZ7 669 aaPredicted RBP11.96□□□□□ -0.49
KDM3B-206ENST00000509468 TMEM214Q6NUQ4 689 aaKnown RBP11.96□□□□□ -0.49
KDM3B-206ENST00000509468 LCTLQ6UWM7 567 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 GALNT7Q86SF2 657 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 ZC3H7AQ8IWR0 971 aaKnown RBP11.96□□□□□ -0.49
KDM3B-206ENST00000509468 SLC35F6Q8N357 371 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 TBC1D19Q8N5T2 526 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 SIRT6Q8N6T7 355 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 OR51Q1Q8NH59 317 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 SLC13A3Q8WWT9 602 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 SLCO2A1Q92959 643 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 ALKBH8Q96BT7 664 aaKnown RBP11.96□□□□□ -0.49
KDM3B-206ENST00000509468 RNF32Q9H0A6 362 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 ATG10Q9H0Y0 220 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 PPANQ9NQ55 473 aaKnown RBP11.96□□□□□ -0.49
KDM3B-206ENST00000509468 PLA2G3Q9NZ20 509 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 ADAMTS6Q9UKP5 1117 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 SNX12Q9UMY4 172 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 OSGIN2Q9Y236 505 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 VWA7Q9Y334 891 aa11.96□□□□□ -0.49
KDM3B-206ENST00000509468 SCN2AQ99250 2005 aa11.96□□□□□ -0.5
KDM3B-206ENST00000509468 CPAMD8Q8IZJ3 1885 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 SPTBN1Q01082 2364 aaKnown RBP11.95□□□□□ -0.5
KDM3B-206ENST00000509468 JRKO75564 520 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 CLDN1O95832 211 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 GABRB3P28472 473 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 AGTR2P50052 363 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 CCR8P51685 355 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 AP1S2P56377 157 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 SKP1P63208 163 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 TIAL1Q01085 375 aaKnown RBP eCLIP11.95□□□□□ -0.5
KDM3B-206ENST00000509468 PDAP1Q13442 181 aaKnown RBP11.95□□□□□ -0.5
KDM3B-206ENST00000509468 PCOLCEQ15113 449 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 MINDY4Q4G0A6 757 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 NIPAL1Q6NVV3 410 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 SYDE1Q6ZW31 735 aaPredicted RBP11.95□□□□□ -0.5
KDM3B-206ENST00000509468 VN1R4Q7Z5H5 301 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 CPEB2Q7Z5Q1 589 aaKnown RBP11.95□□□□□ -0.5
KDM3B-206ENST00000509468 ASPGQ86U10 573 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 CNTN4Q8IWV2 1026 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 PDIK1LQ8N165 341 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 DNAJB8Q8NHS0 232 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 ATL1Q8WXF7 558 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 CERS2Q96G23 380 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 MAGEB10Q96LZ2 347 aaPredicted RBP11.95□□□□□ -0.5
KDM3B-206ENST00000509468 SLX1AQ9BQ83 275 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 SGPP1Q9BX95 441 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 ARL15Q9NXU5 204 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 CORO1CQ9ULV4 474 aaPredicted RBP11.95□□□□□ -0.5
KDM3B-206ENST00000509468 SLC22A7Q9Y694 548 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 CNTRLQ7Z7A1 2325 aa11.95□□□□□ -0.5
KDM3B-206ENST00000509468 FEZF1A0PJY2 475 aa11.94□□□□□ -0.5
KDM3B-206ENST00000509468 A8MUI8 341 aa11.94□□□□□ -0.5
KDM3B-206ENST00000509468 SGK494L7N484 410 aa11.94□□□□□ -0.5
KDM3B-206ENST00000509468 E2F3O00716 465 aa11.94□□□□□ -0.5
KDM3B-206ENST00000509468 LCMT2O60294 686 aaKnown RBP11.94□□□□□ -0.5
KDM3B-206ENST00000509468 WDPCPO95876 746 aa11.94□□□□□ -0.5
KDM3B-206ENST00000509468 CRYABP02511 175 aaKnown RBP11.94□□□□□ -0.5
KDM3B-206ENST00000509468 STSP08842 583 aa11.94□□□□□ -0.5
KDM3B-206ENST00000509468 SLC35G6P0C7Q6 338 aa11.94□□□□□ -0.5
KDM3B-206ENST00000509468 ITGAMP11215 1152 aa11.94□□□□□ -0.5
KDM3B-206ENST00000509468 TCP1P17987 556 aaKnown RBP11.94□□□□□ -0.5
KDM3B-206ENST00000509468 XCR1P46094 333 aa11.94□□□□□ -0.5
KDM3B-206ENST00000509468 CDKN2DP55273 166 aa11.94□□□□□ -0.5
KDM3B-206ENST00000509468 ACTN3Q08043 901 aaPredicted RBP11.94□□□□□ -0.5
KDM3B-206ENST00000509468 PWP1Q13610 501 aa11.94□□□□□ -0.5
KDM3B-206ENST00000509468 MORF4L2Q15014 288 aa11.94□□□□□ -0.5
KDM3B-206ENST00000509468 HERC3Q15034 1050 aa11.94□□□□□ -0.5
KDM3B-206ENST00000509468 BBS9Q3SYG4 887 aa11.94□□□□□ -0.5
KDM3B-206ENST00000509468 TEDDM1Q5T9Z0 273 aa11.94□□□□□ -0.5
KDM3B-206ENST00000509468 PLAG1Q6DJT9 500 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms