RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CRY2Q49AN0 593 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 IQCCQ4KMZ1 466 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 ACTBL2Q562R1 376 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 ZNF667Q5HYK9 610 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 SPANXN2Q5MJ10 180 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 PHYHD1Q5SRE7 291 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 CARD17Q5XLA6 110 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 ARMCX5Q6P1M9 558 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 INO80CQ6PI98 192 aaPredicted RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 SLC16A12Q6ZSM3 486 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 KCTD1Q719H9 257 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 ZNF551Q7Z340 670 aaPredicted RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 TRAPPC11Q7Z392 1133 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 PEX26Q7Z412 305 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 SPATA19Q7Z5L4 167 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 RTN4RL1Q86UN2 441 aaPredicted RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 RCOR2Q8IZ40 523 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 CDK20Q8IZL9 346 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 THEM5Q8N1Q8 247 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 GUF1Q8N442 669 aaKnown RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 SLC15A4Q8N697 577 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 NHLRC2Q8NBF2 726 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 NFKBIDQ8NI38 313 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 LRRC20Q8TCA0 184 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 SNX19Q92543 992 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 ESR2Q92731 530 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 RAB1CQ92928 201 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 MARC2Q969Z3 335 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 TMEM143Q96AN5 459 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 ERLEC1Q96DZ1 483 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 MTERF3Q96E29 417 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 PERPQ96FX8 193 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 LRIG1Q96JA1 1093 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 FIZ1Q96SL8 496 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 ORAI2Q96SN7 254 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 OLFM1Q99784 485 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 GDF15Q99988 308 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 PELOQ9BRX2 385 aaKnown RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 NUP58Q9BVL2 599 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 ZNF416Q9BWM5 594 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 CLPBQ9H078 707 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 CDT1Q9H211 546 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 VCXQ9H320 206 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 FBXO44Q9H4M3 255 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 AUNIPQ9H7T9 357 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 MOV10Q9HCE1 1003 aaKnown RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 MMP25Q9NPA2 562 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 PNO1Q9NRX1 252 aaKnown RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 SETD4Q9NVD3 440 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 ZDHHC7Q9NXF8 308 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 THUMPD1Q9NXG2 353 aaKnown RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 NAGKQ9UJ70 344 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 TRMT6Q9UJA5 497 aaKnown RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 HAO1Q9UJM8 370 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 DBNLQ9UJU6 430 aaKnown RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 AMFRQ9UKV5 643 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 SLC12A4Q9UP95 1085 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 MAN2B2Q9Y2E5 1009 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 AAR2Q9Y312 384 aaKnown RBP4.37□□□□□ -1.71
NIPBL-206ENST00000509429 L3MBTL1Q9Y468 752 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 PCDHAC2Q9Y5I4 1007 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 SNX14Q9Y5W7 946 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 GRIN2DO15399 1336 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 NPHP3Q7Z494 1330 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 PLEKHG1Q9ULL1 1385 aa4.37□□□□□ -1.71
NIPBL-206ENST00000509429 TULP4Q9NRJ4 1543 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 A0A0A6YYH2 397 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 A0A0G2JLW4 131 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 GNG14A0A1W2PPG7 69 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 UBE2QL1A1L167 161 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 A6NJ64 397 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 ASB14A6NK59 587 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 OR2AG2A6NM03 316 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 WASHC1A8K0Z3 465 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 WASH3PC4AMC7 463 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 hCG_2039718K7EN88 272 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 ZNF213O14771 459 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 PHGDHO43175 533 aaKnown RBP4.36□□□□□ -1.71
NIPBL-206ENST00000509429 PSMD3O43242 534 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 ZNF264O43296 627 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 TSPAN2O60636 221 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 JAK2O60674 1132 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 SCN2BO60939 215 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 CDH16O75309 829 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 CSDE1O75534 798 aaKnown RBP4.36□□□□□ -1.71
NIPBL-206ENST00000509429 MT-ND2P03891 347 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 OSMP13725 252 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 AREGP15514 252 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 DDCP20711 480 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 HNF1AP20823 631 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 ZNF10P21506 573 aaPredicted RBP4.36□□□□□ -1.71
NIPBL-206ENST00000509429 MSR1P21757 451 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 MYF6P23409 242 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 UCP1P25874 307 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 PIK3R1P27986 724 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 HSD11B1P28845 292 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 CRABP1P29762 137 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 CASP14P31944 242 aa4.36□□□□□ -1.71
NIPBL-206ENST00000509429 CYP2C18P33260 490 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms