RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 DESP17661 470 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 ERCC2P18074 760 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 MAN1A1P33908 653 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 HNF1BP35680 557 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 RABIFP47224 123 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 CSNK1DP48730 415 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 SUOXP51687 545 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 CLDN6P56747 220 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 PFN3P60673 137 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 SLC25A11Q02978 314 aaKnown RBP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 RAD51Q06609 339 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 SF3A3Q12874 501 aaKnown RBP eCLIP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 BLMHQ13867 455 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 DPYSQ14117 519 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 PDE1CQ14123 709 aaPredicted RBP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 RFTN1Q14699 578 aaPredicted RBP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 DPYSL2Q16555 572 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 UGP2Q16851 508 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 TUBB8Q3ZCM7 444 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 TMEM52BQ4KMG9 183 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 TDRD12Q587J7 1177 aaKnown RBP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 ZNF542PQ5EBM4 170 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 PPP6R3Q5H9R7 873 aaPredicted RBP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 LRRC73Q5JTD7 316 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 ZNF569Q5MCW4 686 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 HES3Q5TGS1 186 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 LRRC38Q5VT99 294 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 RAD9BQ6WBX8 426 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 KDM7AQ6ZMT4 941 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 PTAR1Q7Z6K3 402 aaPredicted RBP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 TRABD2AQ86V40 505 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 PARGQ86W56 976 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 CAMK1DQ8IU85 385 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 ARHGAP12Q8IWW6 846 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 NPWQ8N729 165 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 DENND6BQ8NEG7 585 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 PRSS3P2Q8NHM4 247 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 CXorf40AQ8TE69 158 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 UBE2Q2Q8WVN8 375 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 GLMPQ8WWB7 406 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 ZNF653Q96CK0 615 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 CELF6Q96J87 481 aaKnown RBP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 FAR2Q96K12 515 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 APOLD1Q96LR9 279 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 ZNF641Q96N77 438 aaPredicted RBP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 FCRL5Q96RD9 977 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 BAG1Q99933 345 aaPredicted RBP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 ARPC5LQ9BPX5 153 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 SNRNP25Q9BV90 132 aaKnown RBP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 TP63Q9H3D4 680 aaPredicted RBP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 DHX35Q9H5Z1 703 aaKnown RBP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 ZWILCHQ9H900 591 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 MBNL1Q9NR56 388 aaKnown RBP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 DONSONQ9NYP3 566 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 NLGN3Q9NZ94 848 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 CWC15Q9P013 229 aaKnown RBP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 RNF7Q9UBF6 113 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 IPO11Q9UI26 975 aaKnown RBP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 ANAPC7Q9UJX3 599 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 SLC12A4Q9UP95 1085 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 SIRT4Q9Y6E7 314 aaPredicted RBP3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 COMMD10Q9Y6G5 202 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 CSNK1G3Q9Y6M4 447 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 U3KQA8 63 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 BPTFQ12830 3046 aa3.46□□□□□ -1.86
UBE2D3-226ENST00000508635 PLXNB3Q9ULL4 1909 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 A0A087WV48 116 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 LOC105369274A0A096LPK9 316 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 LOC102723532A0A0G2JNH3 316 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 GXYLT2A0PJZ3 443 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 SLC22A23A1A5C7 686 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 C3orf70A6NLC5 250 aaPredicted RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 TMEM110-MUSTN1A8MSY1 372 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 SYT5O00445 386 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 TRAFD1O14545 582 aaPredicted RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 NKX2-8O15522 239 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 AQP9O43315 295 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 NEBLO76041 1014 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 TM7SF2O76062 418 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 ACTL6BO94805 426 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 PLAUP00749 431 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 ITGA2BP08514 1039 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 KRT7P08729 469 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 ALPPL2P10696 532 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 GM2AP17900 193 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 SERPINA4P29622 427 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 CYLC1P35663 651 aaPredicted RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 SERPINF1P36955 418 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 SLC1A1P43005 524 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 MMP13P45452 471 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 RGRP47804 291 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 CPA2P48052 419 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 PEX5P50542 639 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 DUSP3P51452 185 aaPredicted RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 ZNF81P51508 661 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 ZNF84P51523 738 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 THOP1P52888 689 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 GSDMDP57764 484 aa3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 FAM3BP58499 235 aaPredicted RBP3.45□□□□□ -1.86
UBE2D3-226ENST00000508635 TAS2R40P59535 323 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms