RNA–Protein interactions for RNA: ENST00000508297.2

ATP2C1-213, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-213ENST00000508297 CASC3O15234 703 aaKnown RBP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 MPPED1O15442 326 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 PEX1O43933 1283 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 NOBOXO60393 691 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 DNAJB6O75190 326 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 RHOBTB1O94844 696 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 OR4F21O95013 312 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 MFN2O95140 757 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 MOCS2O96007 188 aaPredicted RBP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 SP9P0CG40 484 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 STAG3L1P0CL83 205 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 ITGAMP11215 1152 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 CEACAM1P13688 526 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 CD9P21926 228 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 JAK1P23458 1154 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 PTBP1P26599 531 aaKnown RBP eCLIP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 PRDX2P32119 198 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 TNFSF8P32971 234 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 CCT6AP40227 531 aaKnown RBP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 FOLR3P41439 243 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 RAP1GAPP47736 663 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 HADHBP55084 474 aaKnown RBP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 PRMT2P55345 433 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 CTSWP56202 376 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 SOX10P56693 466 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 EIF3EP60228 445 aaKnown RBP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 IRX4P78413 519 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 SIM1P81133 766 aaPredicted RBP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 MAT1AQ00266 395 aaKnown RBP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 CAP1Q01518 475 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 HHEXQ03014 270 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 SRSF5Q13243 272 aaKnown RBP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 STK11Q15831 433 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 ACKR1Q16570 336 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 CERKLQ49MI3 558 aaPredicted RBP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 SYT14P1Q58G82 188 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 CMPK2Q5EBM0 449 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 TAF3Q5VWG9 929 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 RGMBQ6NW40 437 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 PLXDC2Q6UX71 529 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 FAM228AQ86W67 206 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 CHSY1Q86X52 802 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 SFTPA2Q8IWL1 248 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 ACVR1CQ8NER5 493 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 SSMEM1Q8WWF3 244 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 RND1Q92730 232 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 P2RX5Q93086 422 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 RFT1Q96AA3 541 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 ULK4Q96C45 1275 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 SLC41A3Q96GZ6 507 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 Q96MF0 132 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 BTBD9Q96Q07 612 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 TRMT61BQ9BVS5 477 aaKnown RBP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 MAGT1Q9H0U3 335 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 UPF2Q9HAU5 1272 aaKnown RBP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 ZNHIT6Q9NWK9 470 aaKnown RBP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 TRNAU1APQ9NX07 287 aaKnown RBP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 FAM53CQ9NYF3 392 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 RCC2Q9P258 522 aaKnown RBP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 TXNDC16Q9P2K2 825 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 KIAA1257Q9ULG3 409 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 CHMP2BQ9UQN3 213 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 LAMP3Q9UQV4 416 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 RUVBL2Q9Y230 463 aaKnown RBP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 WDR83OSQ9Y284 106 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 BCL9LQ86UU0 1499 aa3.78□□□□□ -1.8
ATP2C1-213ENST00000508297 CLTCQ00610 1675 aaKnown RBP3.78□□□□□ -1.81
ATP2C1-213ENST00000508297 NPC1L1Q9UHC9 1359 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 UGGT1Q9NYU2 1555 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 A0A1W2PN81 502 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 OR2M5A3KFT3 312 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 CASTOR2A6NHX0 329 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 ANKRD30BLA7E2S9 258 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 H3BMM5 538 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 RFXAPO00287 272 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 ETV2O00321 342 aaPredicted RBP3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 RNF113AO15541 343 aaKnown RBP3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 NDUFB4O95168 129 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 PLAUP00749 431 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 STAG3L3P0CL85 134 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 HNF1AP20823 631 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 S1PR1P21453 382 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 UGT1A1P22309 533 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 SSTR1P30872 391 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 CHRNA7P36544 502 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 PPP3CCP48454 512 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 NR2C2P49116 596 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 RGS4P49798 205 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 CCT8P50990 548 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 CCL11P51671 97 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 PRELPP51888 382 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 CARD18P57730 90 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 NLRP11P59045 1033 aaKnown RBP3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 CSNK2A1P68400 391 aaPredicted RBP3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 NUCB2P80303 420 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 RELQ04864 619 aaPredicted RBP3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 RASGEF1BQ0VAM2 473 aa3.77□□□□□ -1.81
ATP2C1-213ENST00000508297 PLA2G7Q13093 441 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms