RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 FGF19O95750 216 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 NPPBP16860 134 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 EN2P19622 333 aaPredicted RBP13.98□□□□□ -0.17
DDX41-208ENST00000507955 PRPS1L1P21108 318 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 AGXTP21549 392 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 DCTP40126 519 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 BMXP51813 675 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 FOXD4Q12950 439 aaPredicted RBP13.98□□□□□ -0.17
DDX41-208ENST00000507955 KCNAB2Q13303 367 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 PPIGQ13427 754 aaKnown RBP eCLIP13.98□□□□□ -0.177e-8■■■■□ 21.4
DDX41-208ENST00000507955 DUOXA1Q1HG43 343 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 LAIR2Q6ISS4 152 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 FAM83HQ6ZRV2 1179 aaPredicted RBP13.98□□□□□ -0.17
DDX41-208ENST00000507955 NEK10Q6ZWH5 1172 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 CEP68Q76N32 757 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 GLMNQ92990 594 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 TIFAQ96CG3 184 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 VPS35Q96QK1 796 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 HHIPQ96QV1 700 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 FAM129BQ96TA1 746 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 SORBS1Q9BX66 1292 aaKnown RBP13.98□□□□□ -0.17
DDX41-208ENST00000507955 OSBPL10Q9BXB5 764 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 YTHDF1Q9BYJ9 559 aaKnown RBP13.98□□□□□ -0.17
DDX41-208ENST00000507955 ING2Q9H160 280 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 FAM118AQ9NWS6 357 aa13.98□□□□□ -0.17
DDX41-208ENST00000507955 MYO1GB0I1T2 1018 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 LILRB5O75023 590 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 CA3P07451 260 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 CYP4B1P13584 511 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 ZNF8P17098 575 aaPredicted RBP13.97□□□□□ -0.17
DDX41-208ENST00000507955 CRHBPP24387 322 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 MAPK1P28482 360 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 PPP2R2BQ00005 443 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 ZNF234Q14588 700 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 CTU2Q2VPK5 515 aaKnown RBP13.97□□□□□ -0.17
DDX41-208ENST00000507955 FBXO46Q6PJ61 603 aaPredicted RBP13.97□□□□□ -0.17
DDX41-208ENST00000507955 ZNF852Q6ZMS4 543 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 ETFBKMTQ8IXQ9 262 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 CHPFQ8IZ52 775 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 MMP21Q8N119 569 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 CSGALNACT1Q8TDX6 532 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 NELL1Q92832 810 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 PYURFQ96I23 114 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 PLEKHA8Q96JA3 519 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 DKK3Q9UBP4 350 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 EXO1Q9UQ84 846 aaKnown RBP13.97□□□□□ -0.17
DDX41-208ENST00000507955 TMED5Q9Y3A6 229 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 ZBTB11O95625 1053 aaPredicted RBP13.97□□□□□ -0.17
DDX41-208ENST00000507955 ADRB3P13945 408 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 JUNBP17275 347 aaPredicted RBP13.97□□□□□ -0.17
DDX41-208ENST00000507955 MTAPQ13126 283 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 GAB1Q13480 694 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 ZNF829Q3KNS6 432 aaPredicted RBP13.97□□□□□ -0.17
DDX41-208ENST00000507955 ZNF385BQ569K4 471 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 GRHL2Q6ISB3 625 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 ANGPTL8Q6UXH0 198 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 SLCO4C1Q6ZQN7 724 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 PTOV1Q86YD1 416 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 ZDHHC21Q8IVQ6 265 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 AADATQ8N5Z0 425 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 OR56A3Q8NH54 315 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 OTUB2Q96DC9 234 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 NUS1Q96E22 293 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 C11orf24Q96F05 449 aaPredicted RBP13.97□□□□□ -0.17
DDX41-208ENST00000507955 REXO5Q96IC2 774 aaKnown RBP13.97□□□□□ -0.17
DDX41-208ENST00000507955 TUBA1CQ9BQE3 449 aa13.97□□□□□ -0.17
DDX41-208ENST00000507955 EVPLLA8MZ36 301 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 SLC9A3R1O14745 358 aaPredicted RBP13.96□□□□□ -0.17
DDX41-208ENST00000507955 POP7O75817 140 aaKnown RBP13.96□□□□□ -0.17
DDX41-208ENST00000507955 ADH1CP00326 375 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 RETP07949 1114 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 SRPRAP08240 638 aaKnown RBP13.96□□□□□ -0.17
DDX41-208ENST00000507955 VLDLRP98155 873 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 ABHD18Q0P651 414 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 SLBPQ14493 270 aaKnown RBP eCLIP13.96□□□□□ -0.17
DDX41-208ENST00000507955 GTF2IRD2BQ6EKJ0 949 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 TTC23LQ6PF05 361 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 GTF2IRD2Q86UP8 949 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 NLRP8Q86W28 1048 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 SPARTQ8N0X7 666 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 LEMD2Q8NC56 503 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 WDR48Q8TAF3 677 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 ARMC5Q96C12 935 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 SDCCAG3Q96C92 435 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 FOPNLQ96NB1 174 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 DUSP26Q9BV47 211 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 LGR4Q9BXB1 951 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 DEC1Q9P2X7 70 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 H0YIV9 168 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 HNRNPA1P09651 372 aaKnown RBP eCLIP13.96□□□□□ -0.17
DDX41-208ENST00000507955 ACPPP15309 386 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 CCNA2P20248 432 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 NR4A1P22736 598 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 NUMA1Q14980 2115 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 DPY19L1Q2PZI1 675 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 HNRNPA1L2Q32P51 320 aaKnown RBP13.96□□□□□ -0.17
DDX41-208ENST00000507955 CYP27C1Q4G0S4 372 aa13.96□□□□□ -0.17
DDX41-208ENST00000507955 ZNF658BQ4V348 819 aaPredicted RBP13.96□□□□□ -0.17
DDX41-208ENST00000507955 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.96□□□□□ -0.17
DDX41-208ENST00000507955 GET4Q7L5D6 327 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms