RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 CTRCQ99895 268 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 SH3GL2Q99962 352 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 TMEM79Q9BSE2 394 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 NPLQ9BXD5 320 aaPredicted RBP8.1□□□□□ -1.11
PDGFC-205ENST00000506880 TMEM121BQ9BXQ6 578 aaPredicted RBP8.1□□□□□ -1.11
PDGFC-205ENST00000506880 SLC26A1Q9H2B4 701 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 WDR54Q9H977 334 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 BRF2Q9HAW0 419 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 EML4Q9HC35 981 aaKnown RBP8.1□□□□□ -1.11
PDGFC-205ENST00000506880 MED4Q9NPJ6 270 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 OXSMQ9NWU1 459 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 TMEM9Q9P0T7 183 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 TRPS1Q9UHF7 1281 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 KLK13Q9UKR3 277 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 PADI1Q9ULC6 663 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 WBP11Q9Y2W2 641 aaKnown RBP8.1□□□□□ -1.11
PDGFC-205ENST00000506880 AK5Q9Y6K8 562 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 PTPRQQ9UMZ3 2332 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 IGF2RP11717 2491 aa8.1□□□□□ -1.11
PDGFC-205ENST00000506880 FER1L5A0AVI2 2057 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 A0A087WV48 116 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 IGKV1-8A0A0C4DH67 115 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 ANKDD1BA6NHY2 528 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 A8MT66 165 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 TMEM150CB9EJG8 249 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 C9J4A7 227 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 NPIPB8E9PQR5 432 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 UBXN8O00124 270 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 TK2O00142 265 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 DSCR3O14972 297 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 TAPBPO15533 448 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 BRINP1O60477 761 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 NPHS1O60500 1241 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 SCRG1O75711 98 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 STK17BO94768 372 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 NSA2O95478 260 aaKnown RBP8.09□□□□□ -1.11
PDGFC-205ENST00000506880 CLDN9O95484 217 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 CAPNS1P04632 268 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 CPA3P15088 417 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 FOLR1P15328 257 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 SLC5A2P31639 672 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 SLCO1A2P46721 670 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 HSPA7P48741 367 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 CCNG1P51959 295 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 AP2B1P63010 937 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 IRF9Q00978 393 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 FOXM1Q08050 763 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 CUL3Q13618 768 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 ADPRMQ3LIE5 342 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 SNAP47Q5SQN1 464 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 ZNF678Q5SXM1 525 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 BROXQ5VW32 411 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 MED27Q6P2C8 311 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 FBXO42Q6P3S6 717 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 SUSD1Q6UWL2 747 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 C6orf15Q6UXA7 325 aaPredicted RBP8.09□□□□□ -1.11
PDGFC-205ENST00000506880 UNQ6494/PRO21346Q6UXR6 183 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 CHSY3Q70JA7 882 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 TMEM126BQ8IUX1 230 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 PARP9Q8IXQ6 854 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 PLD6Q8N2A8 252 aaKnown RBP8.09□□□□□ -1.11
PDGFC-205ENST00000506880 PTGR2Q8N8N7 351 aaPredicted RBP8.09□□□□□ -1.11
PDGFC-205ENST00000506880 GBP7Q8N8V2 638 aaPredicted RBP8.09□□□□□ -1.11
PDGFC-205ENST00000506880 RCBTB1Q8NDN9 531 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 PPP4R1Q8TF05 950 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 ZNF483Q8TF39 744 aaPredicted RBP8.09□□□□□ -1.11
PDGFC-205ENST00000506880 USP7Q93009 1102 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 TLCD1Q96CP7 247 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 CATSPER2Q96P56 530 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 OR4K3Q96R72 315 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 ULBP3Q9BZM4 244 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 SLC7A5P2Q9GIP4 190 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 TGIF2Q9GZN2 237 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 ATG10Q9H0Y0 220 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 CAAP1Q9H8G2 361 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 ACTR5Q9H9F9 607 aaPredicted RBP8.09□□□□□ -1.11
PDGFC-205ENST00000506880 TMBIM4Q9HC24 238 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 SLC6A20Q9NP91 592 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 TXLNGQ9NUQ3 528 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 C14orf105Q9NVL8 296 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 TMEM216Q9P0N5 145 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 PISDQ9UG56 409 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 ADAM29Q9UKF5 820 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 PCTPQ9UKL6 214 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 PLAGL1Q9UM63 463 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 SNX6Q9UNH7 406 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.09□□□□□ -1.11
PDGFC-205ENST00000506880 B3GALT1Q9Y5Z6 326 aa8.09□□□□□ -1.11
PDGFC-205ENST00000506880 IGLV3-12A0A075B6K2 115 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 A0A1W2PPM1 405 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 A8MU76 341 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 C9orf172C9J069 976 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 H7BY64 318 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 KIF1CO43896 1103 aaKnown RBP8.08□□□□□ -1.12
PDGFC-205ENST00000506880 CCNT2O60583 730 aaKnown RBP8.08□□□□□ -1.12
PDGFC-205ENST00000506880 CTSVO60911 334 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 SCELO95171 688 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 ESRRBO95718 433 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 KRT6AP02538 564 aa8.08□□□□□ -1.12
PDGFC-205ENST00000506880 KRT6BP04259 564 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms