RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 HMX2A2RU54 273 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 FITM1A5D6W6 292 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 NCF1BA6NI72 391 aaPredicted RBP6.94□□□□□ -1.3
GYPB-206ENST00000506516 NCF1CA8MVU1 366 aaPredicted RBP6.94□□□□□ -1.3
GYPB-206ENST00000506516 SUPT3HB4E1H0 165 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 C9J4A7 227 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 H0YGG7 62 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 H3BMH7 237 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 KERAO60938 352 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 SUPT3HO75486 399 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 STK16O75716 305 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 IPO13O94829 963 aaKnown RBP6.94□□□□□ -1.3
GYPB-206ENST00000506516 WDR47O94967 919 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 RECKO95980 971 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 ALDOAP04075 364 aaKnown RBP6.94□□□□□ -1.3
GYPB-206ENST00000506516 PDGFAP04085 211 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 THBS1P07996 1170 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 RBP1P09455 135 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 CDH1P12830 882 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 NCF1P14598 390 aaPredicted RBP6.94□□□□□ -1.3
GYPB-206ENST00000506516 EPB42P16452 691 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 GNAZP19086 355 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 TFEBP19484 476 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 CXCR2P25025 360 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 PTPN4P29074 926 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 RORAP35398 523 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 DEKP35659 375 aaKnown RBP6.94□□□□□ -1.3
GYPB-206ENST00000506516 GGT5P36269 586 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 ARF3P61204 181 aaPredicted RBP6.94□□□□□ -1.3
GYPB-206ENST00000506516 RHDQ02161 417 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 SRSF6Q13247 344 aaKnown RBP6.94□□□□□ -1.3
GYPB-206ENST00000506516 DNASE1L3Q13609 305 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 OR4D1Q15615 310 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 NDUFA9Q16795 377 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 PTCHD3Q3KNS1 767 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 UBAP2Q5T6F2 1119 aaKnown RBP6.94□□□□□ -1.3
GYPB-206ENST00000506516 C1orf189Q5VU69 101 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 MLIPQ5VWP3 458 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 FRMPD2BQ6IN97 320 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 WDR93Q6P2C0 686 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 PRMT9Q6P2P2 845 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 ZNF517Q6ZMY9 492 aaPredicted RBP6.94□□□□□ -1.3
GYPB-206ENST00000506516 TTLL10Q6ZVT0 673 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 GSPT2Q8IYD1 628 aaKnown RBP6.94□□□□□ -1.3
GYPB-206ENST00000506516 CSNK1A1LQ8N752 337 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 CAMKVQ8NCB2 501 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 PDPRQ8NCN5 879 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 ABHD11Q8NFV4 315 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 OR4K1Q8NGD4 311 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 RHEBL1Q8TAI7 183 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 CT55Q8WUE5 264 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 DCAKDQ8WVC6 231 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 SLC5A11Q8WWX8 675 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 PTERQ96BW5 349 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 RNF31Q96EP0 1072 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 ZNF285Q96NJ3 590 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 CATSPER2Q96P56 530 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 OR2A5Q96R48 311 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 OR4K3Q96R72 315 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 CITED4Q96RK1 184 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 DHRS4Q9BTZ2 278 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 RBCK1Q9BYM8 510 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 UNKQ9C0B0 810 aaKnown RBP6.94□□□□□ -1.3
GYPB-206ENST00000506516 CHST8Q9H2A9 424 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 AKIRIN1Q9H9L7 192 aaPredicted RBP6.94□□□□□ -1.3
GYPB-206ENST00000506516 PPCSQ9HAB8 311 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 IGSF5Q9NSI5 407 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 STARD5Q9NSY2 213 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 WWOXQ9NZC7 414 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 GPRC5BQ9NZH0 403 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 NUDT4Q9NZJ9 180 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 IFT80Q9P2H3 777 aaPredicted RBP6.94□□□□□ -1.3
GYPB-206ENST00000506516 PADI2Q9Y2J8 665 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 PCDHGA6Q9Y5G7 932 aa6.94□□□□□ -1.3
GYPB-206ENST00000506516 ZZEF1O43149 2961 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 LOC105369274A0A096LPK9 316 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 LOC102723532A0A0G2JNH3 316 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 A0A1B0GX78 115 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 TRIM49D1C9J1S8 452 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 MAP2K7O14733 419 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 HAT1O14929 419 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 CLGNO14967 610 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 DSCR3O14972 297 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 ATXN7O15265 892 aaPredicted RBP6.93□□□□□ -1.3
GYPB-206ENST00000506516 NKX2-8O15522 239 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 PRPF4O43172 522 aaKnown RBP eCLIP6.93□□□□□ -1.3
GYPB-206ENST00000506516 OR1F1O43749 312 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 CREG1O75629 220 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 ALBP02768 609 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 ITGB2P05107 769 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 CTSBP07858 339 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 SLC35G6P0C7Q6 338 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 C1GALT1C1LP0DN25 315 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 MYBL2P10244 700 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 GFAPP14136 432 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 F8A1P23610 371 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 GDF5P43026 501 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 SLC6A12P48065 614 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 GLRBP48167 497 aa6.93□□□□□ -1.3
GYPB-206ENST00000506516 KCNC1P48547 511 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms