RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 NOTUMQ6P988 496 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 CCDC60Q8IWA6 550 aaPredicted RBP3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 SLC26A7Q8TE54 656 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 ZNRF4Q8WWF5 429 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 FAM162AQ96A26 154 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 NXPE2Q96DL1 559 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 RBM41Q96IZ5 413 aaKnown RBP3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 C2orf48Q96LS8 159 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 LINC00479Q96M42 142 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 AK8Q96MA6 479 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 FAM218AQ96MZ4 157 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 ADPGKQ9BRR6 497 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 GFRA4Q9GZZ7 299 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 GRPEL1Q9HAV7 217 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 SH3GLB2Q9NR46 395 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 SPHK2Q9NRA0 654 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 ASIC3Q9UHC3 531 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 GTF3C4Q9UKN8 822 aa3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 ELF5Q9UKW6 265 aaPredicted RBP3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 RUVBL2Q9Y230 463 aaKnown RBP3.47□□□□□ -1.85
TOPBP1-204ENST00000505804 IGLV7-46A0A075B6I9 117 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 TRAV18A0A075B6X5 111 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 H3BMM5 538 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 IGHEP01854 428 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 ZSCAN5DPP0CG00 497 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 LUMP51884 338 aaPredicted RBP3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 DCDC1P59894 354 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 HILS1P60008 231 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 GUCY2DQ02846 1103 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 SCN1BQ07699 218 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 IL10RBQ08334 325 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 TRA2AQ13595 282 aaKnown RBP eCLIP3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 SCARB2Q14108 478 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 CDO1Q16878 200 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 ZRANB3Q5FWF4 1079 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 SPOUT1Q5T280 376 aaKnown RBP3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 HECTD3Q5T447 861 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 BSPRYQ5W0U4 402 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 C5orf24Q7Z6I8 188 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 KRT77Q7Z794 578 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 PRUNE1Q86TP1 453 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 KLHL7Q8IXQ5 586 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 TCEANCQ8N8B7 351 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 NCOA7Q8NI08 942 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 ZNF519Q8TB69 540 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 CORO2AQ92828 525 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 SLCO2A1Q92959 643 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 MR1Q95460 341 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 ERO1AQ96HE7 468 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 CCDC114Q96M63 670 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 ZNF599Q96NL3 588 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 NEDD4LQ96PU5 975 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 USP28Q96RU2 1077 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 KRT12Q99456 494 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 SYT11Q9BT88 431 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 TBC1D13Q9NVG8 400 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 HACD3Q9P035 362 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 DNAJB9Q9UBS3 223 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 IL36AQ9UHA7 158 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 KLK4Q9Y5K2 254 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 CSNK1G3Q9Y6M4 447 aa3.46□□□□□ -1.86
TOPBP1-204ENST00000505804 IGKV3D-15A0A087WSY6 115 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 A0A1W2PRQ8 180 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 CYTIPO60759 359 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 MOCS2O96007 188 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 C9P02748 559 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 RLN1P04808 185 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 SERPINB2P05120 415 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 CASTP20810 708 aaKnown RBP3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 PRKACGP22612 351 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 SP100P23497 879 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 HLA-FP30511 346 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 KCNJ1P48048 391 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 OR1D5P58170 312 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 PTK6Q13882 451 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 NECTIN1Q15223 517 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 FCN2Q15485 313 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 TAB1Q15750 504 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 DUSP5Q16690 384 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 TWISTNBQ3B726 338 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 ZNF542PQ5EBM4 170 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 FAM46CQ5VWP2 391 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 PRSS55Q6UWB4 352 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 PRSS35Q8N3Z0 413 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 NKAIN3Q8N8D7 197 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 NHLRC2Q8NBF2 726 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 UXS1Q8NBZ7 420 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 DNASE1L2Q92874 299 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 WBP2Q969T9 261 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 SGF29Q96ES7 293 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 ZNF300Q96RE9 604 aaPredicted RBP3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 PARK7Q99497 189 aaKnown RBP3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 TDRD1Q9BXT4 1180 aaKnown RBP3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 C10orf88Q9H8K7 445 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 SLC12A6Q9UHW9 1150 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 GMEB2Q9UKD1 530 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 ITGA11Q9UKX5 1188 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 POMT2Q9UKY4 750 aa3.45□□□□□ -1.86
TOPBP1-204ENST00000505804 AGTPBP1Q9UPW5 1226 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms