RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 ZIC1Q15915 447 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 PDK4Q16654 411 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 KCTD19Q17RG1 926 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-220ENST00000505005 PRTGQ2VWP7 1150 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 IRAK1BP1Q5VVH5 260 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 LIPJQ5W064 366 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 ATG9BQ674R7 924 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 NXPE4Q6UWF7 544 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 TMEM207Q6UWW9 146 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 MICALCLQ6ZW33 695 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 ASPGQ86U10 573 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 SLC22A9Q8IVM8 553 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 APLFQ8IW19 511 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-220ENST00000505005 OR2Y1Q8NGV0 311 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 ADAMTS18Q8TE60 1221 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 CT55Q8WUE5 264 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 UBLCP1Q8WVY7 318 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-220ENST00000505005 COL26A1Q96A83 441 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 PTCD3Q96EY7 689 aaKnown RBP9.41□□□□□ -0.9
NR1I3-220ENST00000505005 GBP5Q96PP8 586 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 CD244Q9BZW8 370 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 SPRTNQ9H040 489 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-220ENST00000505005 KLHL25Q9H0H3 589 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 VPS11Q9H270 941 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 CHST8Q9H2A9 424 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 MRPL46Q9H2W6 279 aaKnown RBP9.41□□□□□ -0.9
NR1I3-220ENST00000505005 SEMA3GQ9NS98 782 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 PSD3Q9NYI0 1048 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.41□□□□□ -0.9
NR1I3-220ENST00000505005 PTBP2Q9UKA9 531 aaKnown RBP9.41□□□□□ -0.9
NR1I3-220ENST00000505005 TCFL5Q9UL49 500 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 SLC22A14Q9Y267 594 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 MAP4K5Q9Y4K4 846 aa9.41□□□□□ -0.9
NR1I3-220ENST00000505005 V9GYY5 206 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-220ENST00000505005 AKAP13Q12802 2813 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 BLACEA4D250 179 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 PMS2P1A4D2B8 440 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 SUPT3HB4E1H0 165 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 H3BMH7 237 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 MKRN2OSH3BPM6 223 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 STX16-NPEPL1H3BU86 382 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 K7EPI3 171 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 STX16O14662 325 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 MAP2K7O14733 419 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 ATXN7O15265 892 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-220ENST00000505005 OR1F1O43749 312 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 CTSVO60911 334 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 SUPT3HO75486 399 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 SERPINA6P08185 405 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 JAK1P23458 1154 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 CASP2P42575 452 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 MAGEA12P43365 314 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 TSFMP43897 325 aaKnown RBP9.4□□□□□ -0.9
NR1I3-220ENST00000505005 SLC6A12P48065 614 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 VSNL1P62760 191 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 IRF8Q02556 426 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 IFFO1Q0D2I5 559 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 ASPHQ12797 758 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 BIKQ13323 160 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 NAA30Q147X3 362 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-220ENST00000505005 CCDC153Q494R4 210 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 MLIPQ5VWP3 458 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 C19orf48Q6RUI8 117 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 TMIGD1Q6UXZ0 262 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 PPFIBP2Q8ND30 876 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 UBTD2Q8WUN7 234 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 ANKRD49Q8WVL7 239 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 CAVIN3Q969G5 261 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 WDR34Q96EX3 536 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 FAR2Q96K12 515 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 SCYL1Q96KG9 808 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 PPM1MQ96MI6 270 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 TGIF2Q9GZN2 237 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 ACTL8Q9H568 366 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 ALG9Q9H6U8 611 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 VIPAS39Q9H9C1 493 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 CAB39LQ9H9S4 337 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 SLC6A20Q9NP91 592 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 ABCF3Q9NUQ8 709 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 NMRK1Q9NWW6 199 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 SENP1Q9P0U3 644 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 SLC17A6Q9P2U8 582 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 COPG2Q9UBF2 871 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 C19orf25Q9UFG5 118 aaPredicted RBP9.4□□□□□ -0.9
NR1I3-220ENST00000505005 CIDEBQ9UHD4 219 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 GRID1Q9ULK0 1009 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 TSC22D4Q9Y3Q8 395 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 PCDHGA11Q9Y5H2 935 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 SPACA6W5XKT8 324 aa9.4□□□□□ -0.9
NR1I3-220ENST00000505005 EPG5Q9HCE0 2579 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 TRIM49D1C9J1S8 452 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 TERTO14746 1132 aaKnown RBP9.39□□□□□ -0.91
NR1I3-220ENST00000505005 CLEC3AO75596 197 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 TIAF1O95411 115 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 ALDOAP04075 364 aaKnown RBP9.39□□□□□ -0.91
NR1I3-220ENST00000505005 MYBL2P10244 700 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 CDH1P12830 882 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 KRT15P19012 456 aa9.39□□□□□ -0.91
NR1I3-220ENST00000505005 FBLP22087 321 aaKnown RBP9.39□□□□□ -0.91
NR1I3-220ENST00000505005 VARSP26640 1264 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms