RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 SGK494L7N484 410 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 NDC80O14777 642 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 HAT1O14929 419 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 PSMD3O43242 534 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 MFAP3LO75121 409 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 PHF2O75151 1096 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 NIPSNAP2O75323 286 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 NDUFS3O75489 264 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 NEURL1O76050 574 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 PDE9AO76083 593 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 TJP3O95049 919 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 CCNDBP1O95273 360 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 SYF2O95926 243 aaKnown RBP6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 CHRNB4P30926 498 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 CCNFP41002 786 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 CETN2P41208 172 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 GRIA1P42261 906 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 MAGEA1P43355 309 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 AGTR2P50052 363 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 HADHBP55084 474 aaKnown RBP6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 NAP1L1P55209 391 aaKnown RBP6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 FOLH1Q04609 750 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 ACTN3Q08043 901 aaPredicted RBP6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 CDH17Q12864 832 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 FOXD4Q12950 439 aaPredicted RBP6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 TCEAL1Q15170 157 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 EXT1Q16394 746 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 SFT2D3Q587I9 215 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 AARS2Q5JTZ9 985 aaKnown RBP6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 THEMIS2Q5TEJ8 643 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 ZNF468Q5VIY5 522 aaPredicted RBP6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 GARNL3Q5VVW2 1013 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 ICE2Q659A1 982 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 Q71RC1 249 aaPredicted RBP6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 LINC00523Q86TU6 105 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 TGIF2LYQ8IUE0 185 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 RPRMLQ8N4K4 120 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 KIF2BQ8N4N8 673 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 HORMAD2Q8N7B1 307 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 CHDHQ8NE62 594 aaPredicted RBP6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 OR9A1PQ8NGU1 263 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 OR51Q1Q8NH59 317 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 FAM57AQ8TBR7 257 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 MAGEC3Q8TD91 643 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 ASB5Q8WWX0 329 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 SMPDL3AQ92484 453 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 TSLPQ969D9 159 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 PWWP2AQ96N64 755 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 OR2A5Q96R48 311 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 CYTH2Q99418 400 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 LPAR4Q99677 370 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 TREX2Q9BQ50 279 aaPredicted RBP6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 MACROD1Q9BQ69 325 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 CDCP1Q9H5V8 836 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 KCNJ16Q9NPI9 418 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 DNAJB12Q9NXW2 375 aaKnown RBP6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 UTP6Q9NYH9 597 aaKnown RBP6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 PLEKHA6Q9Y2H5 1048 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 SCN2AQ99250 2005 aa6.49□□□□□ -1.37
NPIPB3-203ENST00000504841 PRRC2AP48634 2157 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 INTS1Q8N201 2190 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 CELSR1Q9NYQ6 3014 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 GOLGA6L9A6NEM1 432 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 USP27XA6NNY8 438 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 H0YIG0 161 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 TXNDC9O14530 226 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 KPNA5O15131 536 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 HS6ST1O60243 411 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 NME2P1O60361 137 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 RDH16O75452 317 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 TOXO94900 526 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 PKMP14618 531 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 EZRP15311 586 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 IGFBP2P18065 325 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 NME2P22392 152 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 ADRA1DP25100 572 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 PSMA3P25788 255 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 MSX1P28360 303 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 TPP2P29144 1249 aaPredicted RBP6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 CTNNA1P35221 906 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 PTPN7P35236 360 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 TTPAP49638 278 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 MEOX1P50221 254 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 ITGA8P53708 1063 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 RWDD2BP57060 319 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 GPR85P60893 370 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 SNTB1Q13884 538 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 FAM53BQ14153 422 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 ABRAXAS2Q15018 415 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 NSDHLQ15738 373 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 ANKRD20A4Q4UJ75 823 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 CTSL3PQ5NE16 218 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 MEI1Q5TIA1 1274 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 CES4AQ5XG92 561 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 TMEM211Q6ICI0 200 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 ZNF425Q6IV72 752 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 H3F3CQ6NXT2 135 aa6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 DMRTC2Q8IXT2 367 aaPredicted RBP6.48□□□□□ -1.37
NPIPB3-203ENST00000504841 CYP4X1Q8N118 509 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms