RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 TGFB1P01137 390 aa21.14■□□□□ 0.97
PTPN13-205ENST00000502971 PLIN5Q00G26 463 aa21.14■□□□□ 0.97
PTPN13-205ENST00000502971 PRDX1Q06830 199 aaKnown RBP21.14■□□□□ 0.97
PTPN13-205ENST00000502971 RBBP5Q15291 538 aaKnown RBP21.14■□□□□ 0.97
PTPN13-205ENST00000502971 UGT8Q16880 541 aa21.14■□□□□ 0.97
PTPN13-205ENST00000502971 AASDHQ4L235 1098 aaPredicted RBP21.14■□□□□ 0.97
PTPN13-205ENST00000502971 RUNDC3AQ59EK9 446 aa21.14■□□□□ 0.97
PTPN13-205ENST00000502971 ICE2Q659A1 982 aa21.14■□□□□ 0.97
PTPN13-205ENST00000502971 RD3Q7Z3Z2 195 aa21.14■□□□□ 0.97
PTPN13-205ENST00000502971 METTL4Q8N3J2 472 aa21.14■□□□□ 0.97
PTPN13-205ENST00000502971 ZNF740Q8NDX6 193 aa21.14■□□□□ 0.97
PTPN13-205ENST00000502971 GPR156Q8NFN8 814 aa21.14■□□□□ 0.97
PTPN13-205ENST00000502971 OR8J2Q8NGG1 315 aa21.14■□□□□ 0.97
PTPN13-205ENST00000502971 PAIP1Q9H074 479 aaKnown RBP21.14■□□□□ 0.97
PTPN13-205ENST00000502971 SERHLQ9NQF3 203 aa21.14■□□□□ 0.97
PTPN13-205ENST00000502971 CUEDC1Q9NWM3 386 aaPredicted RBP21.14■□□□□ 0.97
PTPN13-205ENST00000502971 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.14■□□□□ 0.97
PTPN13-205ENST00000502971 ICKQ9UPZ9 632 aa21.14■□□□□ 0.97
PTPN13-205ENST00000502971 SNX13Q9Y5W8 968 aa21.14■□□□□ 0.97
PTPN13-205ENST00000502971 PCM1Q15154 2024 aa21.14■□□□□ 0.97
PTPN13-205ENST00000502971 VCANP13611 3396 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 TRBV5-3A0A0A0MS03 114 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 ARPC2O15144 300 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 AKAP10O43572 662 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 ZNF217O75362 1048 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 SH3BGRLO75368 114 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 COX7A2P14406 83 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 ATP6V1B2P21281 511 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 PSMB5P28074 263 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 CD6P30203 668 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 SLC7A1P30825 629 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 TAF11Q15544 211 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 ALG11Q2TAA5 492 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 CMPK2Q5EBM0 449 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 VN1R5Q7Z5H4 357 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 IFNEQ86WN2 208 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 PROSER1Q86XN7 944 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 GFM2Q969S9 779 aaKnown RBP21.13■□□□□ 0.97
PTPN13-205ENST00000502971 XKR8Q9H6D3 395 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 EGFL7Q9UHF1 273 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 AP4S1Q9Y587 144 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 PCDHB3Q9Y5E6 796 aa21.13■□□□□ 0.97
PTPN13-205ENST00000502971 ANKDD1BA6NHY2 528 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 RASGRP1O95267 797 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 HPCAL1P37235 193 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 GRIA3P42263 894 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 MTPNP58546 118 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 SF1Q15637 639 aaKnown RBP21.12■□□□□ 0.97
PTPN13-205ENST00000502971 ARMCX6Q7L4S7 300 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 COMMD6Q7Z4G1 85 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 CAMKMTQ7Z624 323 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 MSRB3Q8IXL7 192 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 TMEM132CQ8N3T6 1108 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 OR2A1Q8NGT9 310 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 CXorf40BQ96DE9 158 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 PRPF18Q99633 342 aaKnown RBP21.12■□□□□ 0.97
PTPN13-205ENST00000502971 ECSITQ9BQ95 431 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 EFHD1Q9BUP0 239 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 OR51B5Q9H339 312 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 LTB4R2Q9NPC1 389 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 FAM120CQ9NX05 1096 aaKnown RBP21.12■□□□□ 0.97
PTPN13-205ENST00000502971 AHSPQ9NZD4 102 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 DGKBQ9Y6T7 804 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 GNG14A0A1W2PPG7 69 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 KRBA1A5PL33 1030 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 H7BY64 318 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 SCAMP2O15127 329 aaKnown RBP21.12■□□□□ 0.97
PTPN13-205ENST00000502971 AK4P27144 223 aaPredicted RBP21.12■□□□□ 0.97
PTPN13-205ENST00000502971 TRPC1P48995 793 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 ABATP80404 500 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 CYP4F3Q08477 520 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 ZNF763Q0D2J5 394 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 FZD5Q13467 585 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 SELPLGQ14242 412 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 GAS6Q14393 721 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 SWT1Q5T5J6 900 aaKnown RBP21.12■□□□□ 0.97
PTPN13-205ENST00000502971 OR4F3Q6IEY1 312 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 OR7A2PQ8NGA2 310 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 NELL1Q92832 810 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 BIRC7Q96CA5 298 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 PRAP1Q96NZ9 151 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 REXO4Q9GZR2 422 aaKnown RBP21.12■□□□□ 0.97
PTPN13-205ENST00000502971 TMEM168Q9H0V1 697 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 SLC25A37Q9NYZ2 338 aa21.12■□□□□ 0.97
PTPN13-205ENST00000502971 A0A0C4DFX4 3053 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 PRICKLE3O43900 615 aaPredicted RBP21.11■□□□□ 0.97
PTPN13-205ENST00000502971 TNFP01375 233 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 SHMT2P34897 504 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 ACTR1BP42025 376 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 ACTR1AP61163 376 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 UBXN2BQ14CS0 331 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 TRIP10Q15642 601 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 SPPL2CQ8IUH8 684 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 PHACTR4Q8IZ21 702 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 TNIP2Q8NFZ5 429 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 OR13H1Q8NG92 308 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 GBP5Q96PP8 586 aa21.11■□□□□ 0.97
PTPN13-205ENST00000502971 ZNF184Q99676 751 aaPredicted RBP21.11■□□□□ 0.97
PTPN13-205ENST00000502971 THUMPD3Q9BV44 507 aaKnown RBP21.11■□□□□ 0.97
PTPN13-205ENST00000502971 GPR174Q9BXC1 333 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 421.9 ms