RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 ZNF585AQ6P3V2 769 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 MZT2AQ6P582 158 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 TMEM205Q6UW68 189 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 LYPD4Q6UWN0 246 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 SLC13A5Q86YT5 568 aaPredicted RBP9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 AMER2Q8N7J2 671 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 OR5AR1Q8NGP9 310 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 CREB3L4Q8TEY5 395 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 RNASE6Q93091 150 aaKnown RBP9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 C19orf24Q9BVV8 132 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 TRABDQ9H4I3 376 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 IFT22Q9H7X7 185 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 VPS37BQ9H9H4 285 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 LIN7BQ9HAP6 207 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 MKKSQ9NPJ1 570 aaPredicted RBP9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 PNPLA3Q9NST1 481 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 C19orf25Q9UFG5 118 aaPredicted RBP9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 ADGRE2Q9UHX3 823 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 CDC14AQ9UNH5 594 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 ASF1AQ9Y294 204 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 KLF13Q9Y2Y9 288 aaPredicted RBP9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 PKP3Q9Y446 797 aa9.03□□□□□ -0.96
SMARCAL1-213ENST00000496037 A0A1W2PNR3 127 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 KLRC4-KLRK1H3BQV0 150 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 BIN1O00499 593 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 SRPX2O60687 465 aaPredicted RBP9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 NDST3O95803 873 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 TP53P04637 393 aaPredicted RBP9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 ANXA5P08758 320 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 CCND1P24385 295 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 PEBP1P30086 187 aaKnown RBP9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 TNNT3P45378 269 aaPredicted RBP9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 ASCL1P50553 236 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 RPA4Q13156 261 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 MAMLD1Q13495 774 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 KRT81Q14533 505 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 EXT1Q16394 746 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 CHRFAM7AQ494W8 412 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 GXYLT1Q4G148 440 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 BOLA3Q53S33 107 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 FIGNQ5HY92 759 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 WASHC2DQ5SRD0 308 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 MAATS1Q7Z4T9 603 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 MCOLN2Q8IZK6 566 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 OR5M9Q8NGP3 310 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 ZNF398Q8TD17 642 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 SLCO2A1Q92959 643 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 SLC22A18Q96BI1 424 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 ZNF285Q96NJ3 590 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 TSGA13Q96PP4 275 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 GBP4Q96PP9 640 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 ZC3H7BQ9UGR2 993 aaKnown RBP9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 RWDD2AQ9UIY3 292 aa9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 PHF3Q92576 2039 aaKnown RBP9.02□□□□□ -0.97
SMARCAL1-213ENST00000496037 TRBV23-1A0A0A0MS06 115 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 TRAV20A0A0B4J274 112 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 IGHV3-20A0A0C4DH32 117 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 A0A1W2PRQ8 180 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 GOLGA6L4A6NEF3 574 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 KCNK1O00180 336 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 BCKDKO14874 412 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 MED26O95402 600 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 EIF2S1P05198 315 aaKnown RBP9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 PF4V1P10720 104 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 RBP3P10745 1247 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 IL1R2P27930 398 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 PDHA2P29803 388 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 PCK1P35558 622 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 ADH7P40394 386 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 CYB561P49447 251 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 MESDQ14696 234 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 TOMM20Q15388 145 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 TPD52L1Q16890 204 aaPredicted RBP9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 GLT6D1Q7Z4J2 308 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 CPEB2Q7Z5Q1 589 aaKnown RBP9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 KIF18BQ86Y91 864 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 MYLK4Q86YV6 388 aaPredicted RBP9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 HIPK1Q86Z02 1210 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 TBC1D21Q8IYX1 336 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 LGI4Q8N135 537 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 NKAPQ8N5F7 415 aaKnown RBP9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 CCNYQ8ND76 341 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 CABS1Q96KC9 395 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 TIGD1Q96MW7 591 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 NPAS2Q99743 824 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 SH3GL2Q99962 352 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 PCDH18Q9HCL0 1135 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 MTRF1LQ9UGC7 380 aaKnown RBP9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 PLAGL1Q9UM63 463 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 PCDHB14Q9Y5E9 798 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 FAM215AQ9Y5M1 114 aa9.01□□□□□ -0.97
SMARCAL1-213ENST00000496037 GAPDHSO14556 408 aaPredicted RBP9□□□□□ -0.97
SMARCAL1-213ENST00000496037 DYNC1I1O14576 645 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 DVL2O14641 736 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 SGTAO43765 313 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 HRGP04196 525 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 RARAP10276 462 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 NID1P14543 1247 aa9□□□□□ -0.97
SMARCAL1-213ENST00000496037 MSNP26038 577 aaKnown RBP9□□□□□ -0.97
SMARCAL1-213ENST00000496037 KRTAP1-1Q07627 177 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms