RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 OTX2P32243 289 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 FOLR3P41439 243 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 SCTRP47872 440 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 IRF9Q00978 393 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 ATP1A4Q13733 1029 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 FAM53BQ14153 422 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 FBXO48Q5FWF7 155 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 SULT1C3Q6IMI6 304 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 TMEM214Q6NUQ4 689 aaKnown RBP13.66□□□□□ -0.22
SCAP-213ENST00000494938 SLCO4C1Q6ZQN7 724 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 PPP1R32Q7Z5V6 425 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 SHISA5Q8N114 240 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 AMER3Q8N944 861 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 KCT2Q8NC54 265 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 STAG3L4Q8TBR4 150 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 DCAKDQ8WVC6 231 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 SLC13A3Q8WWT9 602 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 ESAMQ96AP7 390 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 MOCOSQ96EN8 888 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 MVB12AQ96EY5 273 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 ATOH8Q96SQ7 321 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 TMEM79Q9BSE2 394 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 ING2Q9H160 280 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 SLC25A18Q9H1K4 315 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 PELI2Q9HAT8 420 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 NMRAL1Q9HBL8 299 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 CDC14AQ9UNH5 594 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 DYRK1BQ9Y463 629 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 KCNE2Q9Y6J6 123 aa13.66□□□□□ -0.22
SCAP-213ENST00000494938 TLN1Q9Y490 2541 aaKnown RBP13.65□□□□□ -0.22
SCAP-213ENST00000494938 A0A087WUV0 522 aaPredicted RBP13.65□□□□□ -0.22
SCAP-213ENST00000494938 A0A087X1B8 175 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 A0A096LPK6 155 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 A0A0A6YYC8 382 aaPredicted RBP13.65□□□□□ -0.22
SCAP-213ENST00000494938 I3L1I5 382 aaPredicted RBP13.65□□□□□ -0.22
SCAP-213ENST00000494938 OR1F1O43749 312 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 PRAMEF4O60810 478 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 WDR47O94967 919 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 ZGLP1P0C6A0 271 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 MTHFD2P13995 350 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 VARSP26640 1264 aaKnown RBP13.65□□□□□ -0.22
SCAP-213ENST00000494938 GCAP28676 217 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 GRK3P35626 688 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 MSH2P43246 934 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 MAGEA12P43365 314 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 C19orf57Q0VDD7 668 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 CHAF1BQ13112 559 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 DSG2Q14126 1118 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 VWA2Q5GFL6 755 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 PRAMEF9Q5VWM5 478 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 SHISA6Q6ZSJ9 500 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 TRMT10CQ7L0Y3 403 aaKnown RBP13.65□□□□□ -0.22
SCAP-213ENST00000494938 PRSS41Q7RTY9 318 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 CCDC91Q7Z6B0 441 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 MRGPREQ86SM8 312 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 TBC1D1Q86TI0 1168 aaPredicted RBP13.65□□□□□ -0.22
SCAP-213ENST00000494938 ASPGQ86U10 573 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 LAPTM4BQ86VI4 370 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 TCAIMQ8N3R3 496 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 ANKRD53Q8N9V6 530 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 CAMKVQ8NCB2 501 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 PDPRQ8NCN5 879 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 STT3BQ8TCJ2 826 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 KCTD4Q8WVF5 259 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 ISL2Q96A47 359 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 MMABQ96EY8 250 aaPredicted RBP13.65□□□□□ -0.22
SCAP-213ENST00000494938 PAFAH2Q99487 392 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 DRC3Q9H069 523 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 EPB41L4BQ9H329 900 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 SOX17Q9H6I2 414 aaPredicted RBP13.65□□□□□ -0.22
SCAP-213ENST00000494938 CD274Q9NZQ7 290 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 RNF112Q9ULX5 631 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 ASB1Q9Y576 335 aa13.65□□□□□ -0.22
SCAP-213ENST00000494938 POC1B-GALNT4F8VUJ3 575 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 MAP2K7O14733 419 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 FFAR3O14843 346 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 GPR42O15529 346 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 RIPK2O43353 540 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 KERAO60938 352 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 RFPL1O75677 317 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 STK16O75716 305 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 CEACAM4O75871 244 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 KLHL2O95198 593 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 INHBAP08476 426 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 ABHD2P08910 425 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 C1GALT1C1LP0DN25 315 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 MYBL2P10244 700 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 EPORP19235 508 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 FBLP22087 321 aaKnown RBP13.64□□□□□ -0.23
SCAP-213ENST00000494938 MMP11P24347 488 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 TYK2P29597 1187 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 HSPA7P48741 367 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 SERPINB9P50453 376 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 CCL11P51671 97 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 REEP5Q00765 189 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 PWP1Q13610 501 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 NDUFA9Q16795 377 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 RAB43Q86YS6 212 aa13.64□□□□□ -0.23
SCAP-213ENST00000494938 PLD6Q8N2A8 252 aaKnown RBP13.64□□□□□ -0.23
SCAP-213ENST00000494938 AFAP1L2Q8N4X5 818 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms