RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 SLC35E2BP0CK96 405 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 IL2P60568 153 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 ASPHQ12797 758 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 PRKAA1Q13131 559 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 SYTL3Q4VX76 610 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 ZNF549Q6P9A3 640 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 Q6ZS92 163 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 SHISA6Q6ZSJ9 500 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 CMC1Q7Z7K0 106 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 RAB43Q86YS6 212 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 ADGRF3Q8IZF5 1079 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 DTWD1Q8N5C7 304 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 RDH11Q8TC12 318 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 GRHL3Q8TE85 626 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 GPR21Q99679 349 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 HGH1Q9BTY7 390 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 PITPNM3Q9BZ71 974 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 DERL2Q9GZP9 239 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 CAB39LQ9H9S4 337 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 FANCEQ9HB96 536 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 SLC22A11Q9NSA0 550 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 SPHK1Q9NYA1 384 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 C5AR2Q9P296 337 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 SERTAD3Q9UJW9 196 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 TMCO1Q9UM00 188 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 KLHL20Q9Y2M5 609 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 DHRS7Q9Y394 339 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 MTORP42345 2549 aa11.26□□□□□ -0.61
CSNK1E-212ENST00000494610 C17orf113A0A1B0GUU1 675 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 C9J4A7 227 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 GOLGA8RI6L899 631 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 LIN7AO14910 233 aaPredicted RBP11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 PHGDHO43175 533 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 TYROBPO43914 113 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 NIPSNAP2O75323 286 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 TPBGLP0DKB5 382 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 FOLR3P41439 243 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 GABRA4P48169 554 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 CDKN2DP55273 166 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 SSPNQ14714 243 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 ZRSR2Q15696 482 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 IGFL3Q6UXB1 125 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 NAPRTQ6XQN6 538 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 NEK10Q6ZWH5 1172 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 FJX1Q86VR8 437 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 TRIM42Q8IWZ5 723 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 MCEMP1Q8IX19 187 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 MYO1HQ8N1T3 1032 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 ZADH2Q8N4Q0 377 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 ZNF655Q8N720 491 aaPredicted RBP11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 CLEC1AQ8NC01 280 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 ST6GALNAC3Q8NDV1 305 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 CATSPER1Q8NEC5 780 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 ACVR1CQ8NER5 493 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 HM13Q8TCT9 377 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 CD200R1Q8TD46 325 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 DYDC1Q8WWB3 177 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 ASZ1Q8WWH4 475 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 LINC00615Q96LM1 132 aaPredicted RBP11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 GBP5Q96PP8 586 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 OLFM1Q99784 485 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 CCM2Q9BSQ5 444 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 INTS9Q9NV88 658 aaKnown RBP11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 ACTR10Q9NZ32 417 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 ACSL5Q9ULC5 683 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 PLAGL1Q9UM63 463 aa11.25□□□□□ -0.61
CSNK1E-212ENST00000494610 PKDREJQ9NTG1 2253 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 NUP210LQ5VU65 1888 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 SYCE1LA8MT33 242 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 PRSS44E7EML9 344 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 H2AFYO75367 372 aaKnown RBP11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 OR2B3O76000 313 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 SNRPB2P08579 225 aaKnown RBP11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 CCDC166P0CW27 439 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 TAC1P20366 129 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 ITGAXP20702 1163 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 AGXTP21549 392 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 ITGA3P26006 1051 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 VARSP26640 1264 aaKnown RBP11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 CLCN7P51798 805 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 PRKAA2P54646 552 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 RPA4Q13156 261 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 SP140Q13342 867 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 CSHL1Q14406 222 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 ACAP2Q15057 778 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 ZNF658BQ4V348 819 aaPredicted RBP11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 HHATQ5VTY9 493 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 SH2D5Q6ZV89 423 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 ADAMTSL2Q86TH1 951 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 HPS6Q86YV9 775 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 CEP97Q8IW35 865 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 PARP9Q8IXQ6 854 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 CLDN19Q8N6F1 224 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 ANKRD42Q8N9B4 389 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 CCDC63Q8NA47 563 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 TCP10LQ8TDR4 215 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 ELMO1Q92556 727 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 CCDC126Q96EE4 140 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 PDLIM5Q96HC4 596 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms