RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 TMED10P49755 219 aaKnown RBP13.3□□□□□ -0.28
VCP-207ENST00000493886 ARSFP54793 590 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 TPD52P55327 224 aaPredicted RBP13.3□□□□□ -0.28
VCP-207ENST00000493886 CSTF3Q12996 717 aaKnown RBP13.3□□□□□ -0.28
VCP-207ENST00000493886 MMAAQ8IVH4 418 aaKnown RBP13.3□□□□□ -0.28
VCP-207ENST00000493886 CFAP206Q8IYR0 622 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 ZNF548Q8NEK5 533 aaPredicted RBP13.3□□□□□ -0.28
VCP-207ENST00000493886 DNAJB8Q8NHS0 232 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 TESCQ96BS2 214 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 ERLEC1Q96DZ1 483 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 EGLN2Q96KS0 407 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 BDH2Q9BUT1 245 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 KCNH6Q9H252 994 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 SERHLQ9NQF3 203 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 SLC6A13Q9NSD5 602 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 OBP2AQ9NY56 170 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 GDE1Q9NZC3 331 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 MAN2B2Q9Y2E5 1009 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 PCDHB14Q9Y5E9 798 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 ERN1O75460 977 aaKnown RBP13.3□□□□□ -0.28
VCP-207ENST00000493886 LRATO95237 230 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 FCARP24071 287 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 MTHFRP42898 656 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 E2F2Q14209 437 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 PGS1Q32NB8 556 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 TMEM52BQ4KMG9 183 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 TANGO2Q6ICL3 276 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 GRHL2Q6ISB3 625 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 CCBE1Q6UXH8 406 aaPredicted RBP13.3□□□□□ -0.28
VCP-207ENST00000493886 ERN2Q76MJ5 926 aaKnown RBP13.3□□□□□ -0.28
VCP-207ENST00000493886 ZC3H7AQ8IWR0 971 aaKnown RBP13.3□□□□□ -0.28
VCP-207ENST00000493886 CSGALNACT1Q8TDX6 532 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 SUSD6Q92537 303 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 FCRL1Q96LA6 429 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 MTERF1Q99551 399 aaKnown RBP13.3□□□□□ -0.28
VCP-207ENST00000493886 RMND5AQ9H871 391 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 CD320Q9NPF0 282 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 ZDHHC4Q9NPG8 344 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 DOLKQ9UPQ8 538 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 YBX2Q9Y2T7 364 aaKnown RBP13.3□□□□□ -0.28
VCP-207ENST00000493886 RBMX2Q9Y388 322 aaKnown RBP13.3□□□□□ -0.28
VCP-207ENST00000493886 U3KQV3 271 aa13.3□□□□□ -0.28
VCP-207ENST00000493886 A0A096LPI6 279 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 ANTXRLA6NF34 631 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 GSTA4O15217 222 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 MAN1A2O60476 641 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 C1orf105O95561 183 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 HNF4AP41235 474 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 IL12RB1P42701 662 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 DPTQ07507 201 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 DDX39BQ13838 428 aaKnown RBP13.29□□□□□ -0.28
VCP-207ENST00000493886 NKG7Q16617 165 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 LRIF1Q5T3J3 769 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 VASH1Q7L8A9 365 aaPredicted RBP13.29□□□□□ -0.28
VCP-207ENST00000493886 RIMKLAQ8IXN7 391 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 GFM2Q969S9 779 aaKnown RBP13.29□□□□□ -0.28
VCP-207ENST00000493886 ITCHQ96J02 903 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 EBPLQ9BY08 206 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 DGCR6LQ9BY27 220 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 TRPV4Q9HBA0 871 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 VPS29Q9UBQ0 182 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 LIMD1Q9UGP4 676 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 INVSQ9Y283 1065 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 AP3M1Q9Y2T2 418 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 PCDHGA11Q9Y5H2 935 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 H0YIV9 168 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 OPRD1P41143 372 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 PCDH1Q08174 1060 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 GTF2H3Q13889 308 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 VITQ6UXI7 678 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 ANKRD46Q86W74 232 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 PHACTR4Q8IZ21 702 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 GIPC3Q8TF64 312 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 AURKBQ96GD4 344 aaPredicted RBP13.29□□□□□ -0.28
VCP-207ENST00000493886 INPP5KQ9BT40 448 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 GORASP2Q9H8Y8 452 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 PLGRKTQ9HBL7 147 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 TRIM39Q9HCM9 518 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 SPATA6Q9NWH7 488 aaPredicted RBP13.29□□□□□ -0.28
VCP-207ENST00000493886 ELOVL7A1L3X0 281 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 B3GALT4O96024 378 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 PRKACGP22612 351 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 PIGAP37287 484 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 ADARB1P78563 741 aaKnown RBP13.29□□□□□ -0.28
VCP-207ENST00000493886 ATP1A4Q13733 1029 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 TMEM132CQ8N3T6 1108 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 LINC00469Q8N7U9 141 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 FBXO15Q8NCQ5 510 aaPredicted RBP13.29□□□□□ -0.28
VCP-207ENST00000493886 NCLNQ969V3 563 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 HHIPQ96QV1 700 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 TOR3AQ9H497 397 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 KAT8Q9H7Z6 458 aaKnown RBP13.29□□□□□ -0.28
VCP-207ENST00000493886 SGK2Q9HBY8 427 aa13.29□□□□□ -0.28
VCP-207ENST00000493886 C1QTNF3-AMACRE9PGA6 284 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 UPK1AO00322 258 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 NOL3O60936 208 aaKnown RBP13.28□□□□□ -0.28
VCP-207ENST00000493886 DEAF1O75398 565 aaPredicted RBP13.28□□□□□ -0.28
VCP-207ENST00000493886 GSNP06396 782 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 EPHX1P07099 455 aa13.28□□□□□ -0.28
VCP-207ENST00000493886 CHRNB3Q05901 458 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms