RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 C19orf81C9J6K1 198 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 RGS14O43566 566 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 BCKDHAP12694 445 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 TNNI3P19429 210 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 OGNP20774 298 aaKnown RBP11.32□□□□□ -0.6
HDAC4-210ENST00000493582 CHMP24386 653 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 S100A3P33764 101 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 CLCN7P51798 805 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 MFSD13AQ14CX5 517 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 FLYWCH1Q4VC44 716 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 ZBTB37Q5TC79 503 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 MANEALQ5VSG8 457 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 TIGD3Q6B0B8 471 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 ZNF367Q7RTV3 350 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 CDH24Q86UP0 819 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 KRT73Q86Y46 540 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 TSSK3Q96PN8 268 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 NSUN3Q9H649 340 aaKnown RBP11.32□□□□□ -0.6
HDAC4-210ENST00000493582 IMPAD1Q9NX62 359 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 DUSP12Q9UNI6 340 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 DLGAP4Q9Y2H0 992 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 WASHC1A8K0Z3 465 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 BTN3A3O00478 584 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 VPS26AO75436 327 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 CLEC2LP0C7M8 214 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 TNFRSF1BP20333 461 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 DDCP20711 480 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 MAN2A2P49641 1150 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 CSTF3Q12996 717 aaKnown RBP11.32□□□□□ -0.6
HDAC4-210ENST00000493582 TNFAIP1Q13829 316 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 LRIF1Q5T3J3 769 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 FAM122CQ6P4D5 195 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 TMEM65Q6PI78 240 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 LBX2Q6XYB7 198 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 PLEKHM3Q6ZWE6 761 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 PIANPQ8IYJ0 282 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 TOP6BLQ8N6T0 577 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 GALNT11Q8NCW6 608 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 OR4K2Q8NGD2 314 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 GPR152Q8TDT2 470 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 OPALINQ96PE5 141 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 OSMRQ99650 979 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 NIPSNAP1Q9BPW8 284 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 GTPBP2Q9BX10 602 aaKnown RBP11.32□□□□□ -0.6
HDAC4-210ENST00000493582 PPIL3Q9H2H8 161 aaKnown RBP11.32□□□□□ -0.6
HDAC4-210ENST00000493582 LRTM1Q9HBL6 345 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 CENPFP49454 3210 aa11.32□□□□□ -0.6
HDAC4-210ENST00000493582 COL4A5P29400 1685 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 RFXANKO14593 260 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 IRAK2O43187 625 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 ULK1O75385 1050 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 SLC22A5O76082 557 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 KCNK5O95279 499 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 SEMG1P04279 462 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 GABRB1P18505 474 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 TACR1P25103 407 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 ITGA1P56199 1179 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 LARS2Q15031 903 aaKnown RBP11.31□□□□□ -0.6
HDAC4-210ENST00000493582 VMACQ2NL98 169 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 IQCCQ4KMZ1 466 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 USP39Q53GS9 565 aaKnown RBP11.31□□□□□ -0.6
HDAC4-210ENST00000493582 AFMIDQ63HM1 303 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 LRRC66Q68CR7 880 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 KLHL17Q6TDP4 642 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 SAMD7Q7Z3H4 446 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 ZZZ3Q8IYH5 903 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 AGBL3Q8NEM8 1001 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 LPCAT1Q8NF37 534 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 TRPM4Q8TD43 1214 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 GALNT9Q9HCQ5 603 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 CLEC2DQ9UHP7 191 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 NDRG2Q9UN36 371 aaKnown RBP11.31□□□□□ -0.6
HDAC4-210ENST00000493582 AP3M1Q9Y2T2 418 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 HS3ST4Q9Y661 456 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 CDRT1O95170 752 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 OTCP00480 354 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 IL32P24001 234 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 HOXC13P31276 330 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 POU4F3Q15319 338 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 XKRXQ6PP77 449 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 ANKS3Q6ZW76 656 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 EIF3MQ7L2H7 374 aaKnown RBP11.31□□□□□ -0.6
HDAC4-210ENST00000493582 ARRDC4Q8NCT1 418 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 ATP6V1C2Q8NEY4 427 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 CD200R1Q8TD46 325 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 C7orf34Q96L11 122 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 DCLRE1CQ96SD1 692 aaKnown RBP11.31□□□□□ -0.6
HDAC4-210ENST00000493582 SPATA9Q9BWV2 254 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 TAPBPLQ9BX59 468 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 ZNF224Q9NZL3 707 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 MALT1Q9UDY8 824 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 RPS6KA6Q9UK32 745 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 PLXNA1Q9UIW2 1896 aa11.31□□□□□ -0.6
HDAC4-210ENST00000493582 SLC35F4A4IF30 521 aa11.3□□□□□ -0.6
HDAC4-210ENST00000493582 GPR39O43194 453 aa11.3□□□□□ -0.6
HDAC4-210ENST00000493582 PKMP14618 531 aaKnown RBP11.3□□□□□ -0.6
HDAC4-210ENST00000493582 HOXB6P17509 224 aaKnown RBP11.3□□□□□ -0.6
HDAC4-210ENST00000493582 APEX1P27695 318 aaKnown RBP11.3□□□□□ -0.6
HDAC4-210ENST00000493582 CDH18Q13634 790 aa11.3□□□□□ -0.6
HDAC4-210ENST00000493582 EIF4HQ15056 248 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms