RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 IL16Q14005 1332 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 H3BMM5 538 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 SLC33A1O00400 549 aaPredicted RBP3.5□□□□□ -1.85
CLK1-213ENST00000492793 KRT2P35908 639 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 TCF7P36402 384 aaPredicted RBP3.5□□□□□ -1.85
CLK1-213ENST00000492793 CLDN17P56750 224 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 GNB1P62873 340 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 ITGA9Q13797 1035 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 TMEM132DQ14C87 1099 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 PTPN14Q15678 1187 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.5□□□□□ -1.85
CLK1-213ENST00000492793 SUSD4Q5VX71 490 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 PSRC1Q6PGN9 363 aaPredicted RBP3.5□□□□□ -1.85
CLK1-213ENST00000492793 Q6ZTC4 211 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 IL17RELQ6ZVW7 336 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 FCRLAQ7L513 359 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 CHMP1BQ7LBR1 199 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 ANKRD46Q86W74 232 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 MEX3DQ86XN8 651 aaKnown RBP3.5□□□□□ -1.85
CLK1-213ENST00000492793 CREBRFQ8IUR6 639 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 CLYBLQ8N0X4 340 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 LSMEM2Q8N112 164 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 TRIM58Q8NG06 486 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 OR10G8Q8NGN5 311 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 HCAR2Q8TDS4 363 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 APOBEC4Q8WW27 367 aaKnown RBP3.5□□□□□ -1.85
CLK1-213ENST00000492793 LGALS12Q96DT0 336 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 GMPPAQ96IJ6 420 aaPredicted RBP3.5□□□□□ -1.85
CLK1-213ENST00000492793 RBM41Q96IZ5 413 aaKnown RBP3.5□□□□□ -1.85
CLK1-213ENST00000492793 C10orf90Q96M02 699 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 CLEC7AQ9BXN2 247 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 DNAI2Q9GZS0 605 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 VPS33BQ9H267 617 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 CUEDC2Q9H467 287 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 DPEP2Q9H4A9 486 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 RAVER2Q9HCJ3 691 aaKnown RBP3.5□□□□□ -1.85
CLK1-213ENST00000492793 MAN2C1Q9NTJ4 1040 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 PLCXD1Q9NUJ7 323 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 ATAD3AQ9NVI7 634 aa3.5□□□□□ -1.85
CLK1-213ENST00000492793 ACEP12821 1306 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 A0A087WUV0 522 aaPredicted RBP3.49□□□□□ -1.85
CLK1-213ENST00000492793 ZNF263O14978 683 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 PGRMC2O15173 223 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 TEX28O15482 410 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 ZG16O60844 167 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 CFC1BP0CG36 223 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 CFC1P0CG37 223 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 GP1BBP13224 206 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 CYP2A7P20853 494 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 ELAVL4P26378 380 aaKnown RBP3.49□□□□□ -1.85
CLK1-213ENST00000492793 SLC6A12P48065 614 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 ATP12AP54707 1039 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 XGP55808 180 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 ST8SIA6P61647 398 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 KRT83P78385 493 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 TMEM187Q14656 261 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 MEP1BQ16820 701 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 ZFP69Q49AA0 526 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 ARHGAP17Q68EM7 881 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 SLC25A47Q6Q0C1 308 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 PRSS55Q6UWB4 352 aaPredicted RBP3.49□□□□□ -1.85
CLK1-213ENST00000492793 PRUNE1Q86TP1 453 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 PRSS35Q8N3Z0 413 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 SMYD1Q8NB12 490 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 OR5AP2Q8NGF4 316 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 OR2T6Q8NHC8 308 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 MAPK15Q8TD08 544 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 TMEM190Q8WZ59 177 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 NEDD4LQ96PU5 975 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 LITAFQ99732 161 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 PIGQQ9BRB3 760 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 ALKBH7Q9BT30 221 aaPredicted RBP3.49□□□□□ -1.85
CLK1-213ENST00000492793 IDI2Q9BXS1 227 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 EGLN3Q9H6Z9 239 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 TMEM206Q9H813 350 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 SRD5A3Q9H8P0 318 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 FGF22Q9HCT0 170 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 TBC1D13Q9NVG8 400 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 CWC25Q9NXE8 425 aaPredicted RBP3.49□□□□□ -1.85
CLK1-213ENST00000492793 HACD3Q9P035 362 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 IL36AQ9UHA7 158 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 NOCTQ9UK39 431 aaKnown RBP3.49□□□□□ -1.85
CLK1-213ENST00000492793 FBXL5Q9UKA1 691 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 PRDM4Q9UKN5 801 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 AGTPBP1Q9UPW5 1226 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 PPP1R3CQ9UQK1 317 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 HBS1LQ9Y450 684 aaKnown RBP3.49□□□□□ -1.85
CLK1-213ENST00000492793 SELENOKQ9Y6D0 94 aa3.49□□□□□ -1.85
CLK1-213ENST00000492793 ILVBLA1L0T0 632 aa3.48□□□□□ -1.85
CLK1-213ENST00000492793 MEIOCA2RUB1 952 aa3.48□□□□□ -1.85
CLK1-213ENST00000492793 MSGN1A6NI15 193 aa3.48□□□□□ -1.85
CLK1-213ENST00000492793 A8MVM7 634 aa3.48□□□□□ -1.85
CLK1-213ENST00000492793 NPIPA3F8WFD2 350 aa3.48□□□□□ -1.85
CLK1-213ENST00000492793 SLCO1B7G3V0H7 640 aa3.48□□□□□ -1.85
CLK1-213ENST00000492793 SLC30A4O14863 429 aa3.48□□□□□ -1.85
CLK1-213ENST00000492793 KIF5CO60282 957 aa3.48□□□□□ -1.85
CLK1-213ENST00000492793 CYTIPO60759 359 aa3.48□□□□□ -1.85
CLK1-213ENST00000492793 RAD51DO75771 328 aa3.48□□□□□ -1.85
CLK1-213ENST00000492793 NXPH2O95156 264 aa3.48□□□□□ -1.85
CLK1-213ENST00000492793 CLDN1O95832 211 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms