RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 TNFRSF8P28908 595 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 SOX11P35716 441 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 TNFSF10P50591 281 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 TERF1P54274 439 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 TBPL1P62380 186 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 MEF2AQ02078 507 aaPredicted RBP8.3□□□□□ -1.08
NUP50-217ENST00000491860 PDAP1Q13442 181 aaKnown RBP8.3□□□□□ -1.08
NUP50-217ENST00000491860 CUL1Q13616 776 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 CRYMQ14894 314 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 HERC3Q15034 1050 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 RNASEH2BQ5TBB1 312 aaKnown RBP8.3□□□□□ -1.08
NUP50-217ENST00000491860 ABHD17BQ5VST6 288 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 CAPN13Q6MZZ7 669 aaPredicted RBP8.3□□□□□ -1.08
NUP50-217ENST00000491860 MTFR2Q6P444 385 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 ZNF549Q6P9A3 640 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 LCTLQ6UWM7 567 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 LINC00696Q6ZRV3 163 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 C17orf64Q86WR6 236 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 CPNE9Q8IYJ1 553 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 PDIK1LQ8N165 341 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 AMER3Q8N944 861 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 OR1N1Q8NGS0 311 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 GIMAP7Q8NHV1 300 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 GRHL3Q8TE85 626 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 SLCO2A1Q92959 643 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 PRAP1Q96NZ9 151 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 OR1F2PQ96R84 312 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 OSBPL9Q96SU4 736 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 RUBCNLQ9H714 662 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 IARS2Q9NSE4 1012 aaKnown RBP8.3□□□□□ -1.08
NUP50-217ENST00000491860 OLAHQ9NV23 265 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 STOX2Q9P2F5 926 aaPredicted RBP8.3□□□□□ -1.08
NUP50-217ENST00000491860 GALPQ9UBC7 116 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 ASIC3Q9UHC3 531 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 MKL2Q9ULH7 1088 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 NEU2Q9Y3R4 380 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 PCDHGB6Q9Y5F9 930 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 SLC22A7Q9Y694 548 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 SCN2AQ99250 2005 aa8.3□□□□□ -1.08
NUP50-217ENST00000491860 A1L4Q6 167 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 KRT87PA6NCN2 255 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 SYNDIG1LA6NDD5 238 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 FOXS1O43638 330 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 HAUS5O94927 633 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 MED26O95402 600 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 CLDN1O95832 211 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 JAK1P23458 1154 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 BCL6P41182 706 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 FOXL2P58012 376 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 IL2P60568 153 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 EEF1A2Q05639 463 aaKnown RBP8.29□□□□□ -1.08
NUP50-217ENST00000491860 RBPJQ06330 500 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 Q0VFX4 171 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 PWP1Q13610 501 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 MORF4L2Q15014 288 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 PCOLCEQ15113 449 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 EXT1Q16394 746 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 MFSD4BQ5TF39 518 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 DUPD1Q68J44 220 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 PLAG1Q6DJT9 500 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 FAM45BPQ6NSW5 357 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 AGTRAPQ6RW13 159 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 PIWIL4Q7Z3Z4 852 aaKnown RBP8.29□□□□□ -1.08
NUP50-217ENST00000491860 CPEB2Q7Z5Q1 589 aaKnown RBP8.29□□□□□ -1.08
NUP50-217ENST00000491860 STRA8Q7Z7C7 330 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 ASPGQ86U10 573 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 ZC3H7AQ8IWR0 971 aaKnown RBP8.29□□□□□ -1.08
NUP50-217ENST00000491860 PRSS58Q8IYP2 241 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 LGI4Q8N135 537 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 ARHGEF39Q8N4T4 335 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 HORMAD2Q8N7B1 307 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 PPFIBP2Q8ND30 876 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 FAM45AQ8TCE6 357 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 BRIX1Q8TDN6 353 aaKnown RBP8.29□□□□□ -1.08
NUP50-217ENST00000491860 SLC13A3Q8WWT9 602 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 ANKRD7Q92527 254 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 PSMF1Q92530 271 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 C8orf44Q96CB5 159 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 MS4A14Q96JA4 679 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 ZNF354BQ96LW1 612 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 SLC30A3Q99726 388 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 SLX1AQ9BQ83 275 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 SARGQ9BW04 601 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.29□□□□□ -1.08
NUP50-217ENST00000491860 ABCF3Q9NUQ8 709 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 NSMCE4AQ9NXX6 385 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 PTGFRNQ9P2B2 879 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 SUCOQ9UBS9 1254 aaKnown RBP8.29□□□□□ -1.08
NUP50-217ENST00000491860 SNX12Q9UMY4 172 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 MED16Q9Y2X0 877 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 CPAMD8Q8IZJ3 1885 aa8.29□□□□□ -1.08
NUP50-217ENST00000491860 CSMD1Q96PZ7 3565 aa8.28□□□□□ -1.08
NUP50-217ENST00000491860 OR5H15A6NDH6 313 aa8.28□□□□□ -1.08
NUP50-217ENST00000491860 MASP2O00187 686 aa8.28□□□□□ -1.08
NUP50-217ENST00000491860 NRP2O60462 931 aa8.28□□□□□ -1.08
NUP50-217ENST00000491860 PRAMEF2O60811 474 aa8.28□□□□□ -1.08
NUP50-217ENST00000491860 JRKO75564 520 aa8.28□□□□□ -1.08
NUP50-217ENST00000491860 KLHL18O94889 574 aa8.28□□□□□ -1.08
NUP50-217ENST00000491860 RASAL1O95294 804 aa8.28□□□□□ -1.08
NUP50-217ENST00000491860 STSP08842 583 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms