RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 MRPS2Q9Y399 296 aaKnown RBP15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 KCNE2Q9Y6J6 123 aa15.73■□□□□ 0.11
PDLIM2-217ENST00000491330 FLNBO75369 2602 aaKnown RBP15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 H2AFYO75367 372 aaKnown RBP15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 BMP10O95393 424 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 DDAH2O95865 285 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 F7P08709 466 aaPredicted RBP15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 HPDP32754 393 aaPredicted RBP15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 RPL21P46778 160 aaKnown RBP15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 AGTR2P50052 363 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 CDKN2DP55273 166 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 YBX1P67809 324 aaKnown RBP15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 MFAP5Q13361 173 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 ZNF169Q14929 603 aaPredicted RBP15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 WHAMMP3Q1A5X7 153 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 MSS51Q4VC12 460 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 ATG9BQ674R7 924 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 LINC00696Q6ZRV3 163 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 STRA8Q7Z7C7 330 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 PLD3Q8IV08 490 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 ANKMY2Q8IV38 441 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 LRRC56Q8IYG6 542 aaPredicted RBP15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 FBXO36Q8NEA4 188 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 SNRNP40Q96DI7 357 aaKnown RBP15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 PDLIM5Q96HC4 596 aaKnown RBP15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 EGFL8Q99944 293 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 CAPS2Q9BXY5 557 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 PRM3Q9NNZ6 103 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 ADAMTS6Q9UKP5 1117 aa15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 NOVA2Q9UNW9 492 aaKnown RBP15.72■□□□□ 0.11
PDLIM2-217ENST00000491330 TP73O15350 636 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 OR1F1O43749 312 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 NRP2O60462 931 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 ALOX12BO75342 701 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 BANF1O75531 89 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 GUCA1CO95843 209 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 SERPIND1P05546 499 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 CDH1P12830 882 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 GP1BBP13224 206 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 JAK1P23458 1154 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 HNMTP50135 292 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 FOXL2P58012 376 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 CSNK1G2P78368 415 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 ACTN3Q08043 901 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 PWP1Q13610 501 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 RBM20Q5T481 1227 aaKnown RBP15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 ABHD17BQ5VST6 288 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 FAAH2Q6GMR7 532 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 FAM180AQ6UWF9 173 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 ABHD13Q7L211 337 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 ZBED8Q8IZ13 594 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 MFSD9Q8NBP5 474 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 MNS1Q8NEH6 495 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 TRPV3Q8NET8 790 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 OR9A4Q8NGU2 314 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 SSC4DQ8WTU2 575 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 FBXL8Q96CD0 374 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 SGPP1Q9BX95 441 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 MOCS1Q9NZB8 636 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 SNX24Q9Y343 169 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 SLC22A7Q9Y694 548 aa15.71■□□□□ 0.11
PDLIM2-217ENST00000491330 MYO18BQ8IUG5 2567 aa15.71■□□□□ 0.1
PDLIM2-217ENST00000491330 HEATR5BQ9P2D3 2071 aa15.71■□□□□ 0.1
PDLIM2-217ENST00000491330 TRAV17A0A0B4J275 112 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 ANKUB1A6NFN9 424 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 TCP11X1B4DZS4 312 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 RAD51CO43502 376 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 PRR35P0CG20 571 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 NPPBP16860 134 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 GABRB3P28472 473 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 BCL6P41182 706 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 TSFMP43897 325 aaKnown RBP15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 XCR1P46094 333 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 IGFL2Q6UWQ7 119 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 ADAMTSL2Q86TH1 951 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 Q8NA96 180 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 OR51Q1Q8NH59 317 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 C8orf44Q96CB5 159 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 AIF1LQ9BQI0 150 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 TSPYL1Q9H0U9 437 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 CNOT10Q9H9A5 744 aaKnown RBP15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 CLK4Q9HAZ1 481 aaKnown RBP15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 POPDC3Q9HBV1 291 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 GPAMQ9HCL2 828 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 ASF1BQ9NVP2 202 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 PTGFRNQ9P2B2 879 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 CTNNAL1Q9UBT7 734 aa15.7■□□□□ 0.1
PDLIM2-217ENST00000491330 IGHV1-45A0A0A0MS14 117 aa15.69■□□□□ 0.1
PDLIM2-217ENST00000491330 FAM95CA0A1B0GW59 222 aa15.69■□□□□ 0.1
PDLIM2-217ENST00000491330 TRBC2A0A5B9 178 aa15.69■□□□□ 0.1
PDLIM2-217ENST00000491330 FEZF1A0PJY2 475 aa15.69■□□□□ 0.1
PDLIM2-217ENST00000491330 PSMD12O00232 456 aaPredicted RBP15.69■□□□□ 0.1
PDLIM2-217ENST00000491330 NDUFS4O43181 175 aa15.69■□□□□ 0.1
PDLIM2-217ENST00000491330 FOXS1O43638 330 aa15.69■□□□□ 0.1
PDLIM2-217ENST00000491330 PER3P56645 1201 aa15.69■□□□□ 0.1
PDLIM2-217ENST00000491330 MEF2AQ02078 507 aaPredicted RBP15.69■□□□□ 0.1
PDLIM2-217ENST00000491330 EEF1A2Q05639 463 aaKnown RBP15.69■□□□□ 0.1
PDLIM2-217ENST00000491330 NR6A1Q15406 480 aa15.69■□□□□ 0.1
PDLIM2-217ENST00000491330 EXT1Q16394 746 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms