RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 HEXDCQ8WVB3 486 aa4.22□□□□□ -1.73
HMGB1P38-201ENST00000490557 AK8Q96MA6 479 aa4.22□□□□□ -1.73
HMGB1P38-201ENST00000490557 ZNF599Q96NL3 588 aa4.22□□□□□ -1.73
HMGB1P38-201ENST00000490557 KLHL5Q96PQ7 755 aa4.22□□□□□ -1.73
HMGB1P38-201ENST00000490557 ADPGKQ9BRR6 497 aa4.22□□□□□ -1.73
HMGB1P38-201ENST00000490557 INPP5KQ9BT40 448 aa4.22□□□□□ -1.73
HMGB1P38-201ENST00000490557 UPF3AQ9H1J1 476 aaKnown RBP4.22□□□□□ -1.73
HMGB1P38-201ENST00000490557 TMEM181Q9P2C4 612 aa4.22□□□□□ -1.73
HMGB1P38-201ENST00000490557 SLC12A6Q9UHW9 1150 aa4.22□□□□□ -1.73
HMGB1P38-201ENST00000490557 A0A087WV48 116 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 TRBV4-1A0A0J9YWV2 114 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 A0A1W2PR80 420 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 KPNA7A9QM74 516 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 C17orf105B2RV13 164 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 C2CD4DB7Z1M9 353 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 F8VVB4 439 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 F8VWA3 439 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 DUS4LO95620 317 aaKnown RBP4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 C9P02748 559 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 SCG2P13521 617 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 MUTP22033 750 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 PRKACGP22612 351 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 ATP6V1E1P36543 226 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 XGP55808 180 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 CYCSP99999 105 aaKnown RBP4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 FCN2Q15485 313 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 MTHFSDQ2M296 383 aaKnown RBP4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 TTC31Q49AM3 519 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 CYB5D1Q6P9G0 228 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 IL27RAQ6UWB1 636 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 LEKR1Q6ZMV7 388 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 FAM47EQ6ZV65 393 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 LRRTM1Q86UE6 522 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 CROCCP3Q8IVE0 287 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 C4orf19Q8IY42 314 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 GBP7Q8N8V2 638 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 LRTM2Q8N967 370 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 ZNF485Q8NCK3 441 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 OR5T2Q8NGG2 359 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 IWS1Q96ST2 819 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 SYT11Q9BT88 431 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 CDK19Q9BWU1 502 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 TDRD1Q9BXT4 1180 aaKnown RBP4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 FGFBP2Q9BYJ0 223 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 XPO4Q9C0E2 1151 aaKnown RBP4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 TEX10Q9NXF1 929 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 PRDM4Q9UKN5 801 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 ELF5Q9UKW6 265 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 POMT1Q9Y6A1 747 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 CSNK1G3Q9Y6M4 447 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 COLEC10Q9Y6Z7 277 aa4.21□□□□□ -1.74
HMGB1P38-201ENST00000490557 TRAV34A0A0B4J273 112 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 A0A0J9YWU9 116 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 H7C423 109 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 CCL24O00175 119 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 DCXO43602 365 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 BAG3O95817 575 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 ATP6V1B1P15313 513 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 TCF4P15884 667 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 AADACP22760 399 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 NAGLUP54802 743 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 DCDC1P59894 354 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 SCN1BQ07699 218 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 IL10RBQ08334 325 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 TNK1Q13470 666 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 FASTKD1Q53R41 847 aaKnown RBP4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 DNAJC21Q5F1R6 531 aaKnown RBP4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 CCDC158Q5M9N0 1113 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 CAVIN1Q6NZI2 390 aaKnown RBP4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 IL17RELQ6ZVW7 336 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 PIGWQ7Z7B1 504 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 ZER1Q7Z7L7 766 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 CCDC60Q8IWA6 550 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 GPC2Q8N158 579 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 ARL6IP6Q8N6S5 226 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 TCEANCQ8N8B7 351 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 NUP37Q8NFH4 326 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 RAD54LQ92698 747 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 SLCO2A1Q92959 643 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 P2RX5Q93086 422 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 TRIM15Q9C019 465 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 GFRA4Q9GZZ7 299 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 MED20Q9H944 212 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 GRPEL1Q9HAV7 217 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 PANK4Q9NVE7 773 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 TBC1D13Q9NVG8 400 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 CHCHD3Q9NX63 227 aaKnown RBP4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 IL36AQ9UHA7 158 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 RUVBL2Q9Y230 463 aaKnown RBP4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 PRSS21Q9Y6M0 314 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 RNF215Q9Y6U7 377 aa4.2□□□□□ -1.74
HMGB1P38-201ENST00000490557 ANTXRLA6NF34 631 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 TMEM150CB9EJG8 249 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 C19orf81C9J6K1 198 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 FAM86B1E9PN63 330 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 SLC1A7O00341 560 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 PPIP5K2O43314 1243 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 ZFAND5O76080 213 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 FAM86B2P0C5J1 330 aa4.19□□□□□ -1.74
HMGB1P38-201ENST00000490557 F3P13726 295 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms