RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 PIP5K1BO14986 540 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 ULK1O75385 1050 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 RFPL3O75679 317 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 DKK1O94907 266 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 CSRP1P21291 193 aaKnown RBP12.8□□□□□ -0.36
TRAIP-210ENST00000489948 PRPH2P23942 346 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 BCL6P41182 706 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 HTR6P50406 440 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 E2F1Q01094 437 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 BTKQ06187 659 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 TRA2AQ13595 282 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRAIP-210ENST00000489948 ZIC1Q15915 447 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 TCHHL1Q5QJ38 904 aaPredicted RBP12.8□□□□□ -0.36
TRAIP-210ENST00000489948 FAM92BQ6ZTR7 304 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 VN1R5Q7Z5H4 357 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 ANKRD53Q8N9V6 530 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 MFSD9Q8NBP5 474 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 ZNF740Q8NDX6 193 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 METTL2AQ96IZ6 378 aaKnown RBP12.8□□□□□ -0.36
TRAIP-210ENST00000489948 PPM1MQ96MI6 270 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 GFM1Q96RP9 751 aaKnown RBP12.8□□□□□ -0.36
TRAIP-210ENST00000489948 ZMYND15Q9H091 742 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 TUBB1Q9H4B7 451 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 DMRT3Q9NQL9 472 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 TOR4AQ9NXH8 423 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 ZFP69BQ9UJL9 534 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 TIMM22Q9Y584 194 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 AP1M2Q9Y6Q5 423 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 PCNX2A6NKB5 2137 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 CEP250Q9BV73 2442 aa12.8□□□□□ -0.36
TRAIP-210ENST00000489948 IGHV5-51A0A0C4DH38 117 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.79□□□□□ -0.36
TRAIP-210ENST00000489948 SLC9B1P1A6NJY1 282 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 FFAR3O14843 346 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 GPR42O15529 346 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 NRP2O60462 931 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 SNX3O60493 162 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 CTSVO60911 334 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 VPS4BO75351 444 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 SKAP2O75563 359 aaPredicted RBP12.79□□□□□ -0.36
TRAIP-210ENST00000489948 CLEC3AO75596 197 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 PDYNP01213 254 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 JUNP05412 331 aaKnown RBP12.79□□□□□ -0.36
TRAIP-210ENST00000489948 KITP10721 976 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 HOXB3P14651 431 aaPredicted RBP12.79□□□□□ -0.36
TRAIP-210ENST00000489948 PVRP15151 417 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 GABRA4P48169 554 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 HSD11B2P80365 405 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 MEF2AQ02078 507 aaPredicted RBP12.79□□□□□ -0.36
TRAIP-210ENST00000489948 SPIDRQ14159 915 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 ABRAXAS2Q15018 415 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 PDCD2Q16342 344 aaPredicted RBP12.79□□□□□ -0.36
TRAIP-210ENST00000489948 ZC3H12BQ5HYM0 836 aaKnown RBP12.79□□□□□ -0.36
TRAIP-210ENST00000489948 CACHD1Q5VU97 1274 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 EPGNQ6UW88 154 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 ZNF574Q6ZN55 896 aaPredicted RBP12.79□□□□□ -0.36
TRAIP-210ENST00000489948 TMPRSS9Q7Z410 1059 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 SPATA21Q7Z572 469 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 ARHGAP22Q7Z5H3 698 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 CPLX4Q7Z7G2 160 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 D2HGDHQ8N465 521 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 TRPV3Q8NET8 790 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 HUS1BQ8NHY5 278 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 ZNF473Q8WTR7 871 aaKnown RBP12.79□□□□□ -0.36
TRAIP-210ENST00000489948 SELENOMQ8WWX9 145 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 PRR11Q96HE9 360 aaPredicted RBP12.79□□□□□ -0.36
TRAIP-210ENST00000489948 ZNF285Q96NJ3 590 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 OR2A5Q96R48 311 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 NUF2Q9BZD4 464 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 NPHS2Q9NP85 383 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 TMEM9Q9P0T7 183 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 KLHL20Q9Y2M5 609 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 FIS1Q9Y3D6 152 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 CCL27Q9Y4X3 112 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 CACNA1GO43497 2377 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 CFAP54Q96N23 3096 aa12.79□□□□□ -0.36
TRAIP-210ENST00000489948 IGHV5-10-1A0A0J9YXX1 117 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 FEZF1A0PJY2 475 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 ANKDD1BA6NHY2 528 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 SLC28A1O00337 649 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 SDHDO14521 159 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 TM4SF5O14894 197 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 MAP3K7O43318 606 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 OR1F1O43749 312 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 KIF1CO43896 1103 aaKnown RBP12.78□□□□□ -0.36
TRAIP-210ENST00000489948 GFRA3O60609 400 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 RASSF9O75901 435 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 RSL1D1O76021 490 aaKnown RBP12.78□□□□□ -0.36
TRAIP-210ENST00000489948 SEMA3DO95025 777 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 PRR35P0CG20 571 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 ACPPP15309 386 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 NELFEP18615 380 aaKnown RBP12.78□□□□□ -0.36
TRAIP-210ENST00000489948 SERPINB3P29508 390 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 CCKBRP32239 447 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 MLLT3P42568 568 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-210ENST00000489948 PPM1FP49593 454 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-210ENST00000489948 PDX1P52945 283 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 ARFIP1P53367 373 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 AQP5P55064 265 aa12.78□□□□□ -0.36
TRAIP-210ENST00000489948 ZFP36L1Q07352 338 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms