RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 PPM1NQ8N819 430 aa16.77■□□□□ 0.28
COL6A1-204ENST00000486023 KCT2Q8NC54 265 aa16.77■□□□□ 0.28
COL6A1-204ENST00000486023 FBXO25Q8TCJ0 367 aa16.77■□□□□ 0.28
COL6A1-204ENST00000486023 SLC13A3Q8WWT9 602 aa16.77■□□□□ 0.28
COL6A1-204ENST00000486023 FBXL8Q96CD0 374 aa16.77■□□□□ 0.28
COL6A1-204ENST00000486023 MRRFQ96E11 262 aaKnown RBP16.77■□□□□ 0.28
COL6A1-204ENST00000486023 PDLIM5Q96HC4 596 aaKnown RBP16.77■□□□□ 0.28
COL6A1-204ENST00000486023 OR4K3Q96R72 315 aa16.77■□□□□ 0.28
COL6A1-204ENST00000486023 ZNF552Q9H707 407 aaPredicted RBP16.77■□□□□ 0.28
COL6A1-204ENST00000486023 ZBTB20Q9HC78 741 aaPredicted RBP16.77■□□□□ 0.28
COL6A1-204ENST00000486023 ZNF160Q9HCG1 818 aa16.77■□□□□ 0.28
COL6A1-204ENST00000486023 HCN3Q9P1Z3 774 aa16.77■□□□□ 0.28
COL6A1-204ENST00000486023 DYRK1BQ9Y463 629 aa16.77■□□□□ 0.28
COL6A1-204ENST00000486023 PCDHGB7Q9Y5F8 929 aa16.77■□□□□ 0.28
COL6A1-204ENST00000486023 FER1L5A0AVI2 2057 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 IDSB3KWA1 339 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 SGK494L7N484 410 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 MAP2K7O14733 419 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 PHGDHO43175 533 aaKnown RBP16.76■□□□□ 0.27
COL6A1-204ENST00000486023 ENO2P09104 434 aaPredicted RBP16.76■□□□□ 0.27
COL6A1-204ENST00000486023 ACPPP15309 386 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 IL1RNP18510 177 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 SLC26A3P40879 764 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 MAGEA4P43358 317 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 GPX6P59796 221 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 CAV1Q03135 178 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 RELAQ04206 551 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 C18orf21Q32NC0 220 aaPredicted RBP16.76■□□□□ 0.27
COL6A1-204ENST00000486023 C8orf74Q6P047 294 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 SBSNQ6UWP8 590 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 RBMXL3Q8N7X1 1067 aaKnown RBP16.76■□□□□ 0.27
COL6A1-204ENST00000486023 AMER3Q8N944 861 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 CAMKVQ8NCB2 501 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 OR11G2Q8NGC1 345 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 OR56A3Q8NH54 315 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 CPT1CQ8TCG5 803 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 MVB12AQ96EY5 273 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 THOC3Q96J01 351 aaKnown RBP16.76■□□□□ 0.27
COL6A1-204ENST00000486023 VPS50Q96JG6 964 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 SMAD5Q99717 465 aaKnown RBP16.76■□□□□ 0.27
COL6A1-204ENST00000486023 LRRC1Q9BTT6 524 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 MKL2Q9ULH7 1088 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 SLC22A14Q9Y267 594 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 MED13Q9UHV7 2174 aa16.76■□□□□ 0.27
COL6A1-204ENST00000486023 KCNE1BA0A087WTH5 132 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 FAM155BO75949 473 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 UQCRHP07919 91 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 CD97P48960 835 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 RBBP5Q15291 538 aaKnown RBP16.75■□□□□ 0.27
COL6A1-204ENST00000486023 MINDY4Q4G0A6 757 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 ZDHHC24Q6UX98 284 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 THOC6Q86W42 341 aaKnown RBP16.75■□□□□ 0.27
COL6A1-204ENST00000486023 ATCAYQ86WG3 371 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 SHISA5Q8N114 240 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 MFSD9Q8NBP5 474 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 ZNF740Q8NDX6 193 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 SLC5A11Q8WWX8 675 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 NEIL2Q969S2 332 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 NACC2Q96BF6 587 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 THAP11Q96EK4 314 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 MOCOSQ96EN8 888 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 TSPAN17Q96FV3 270 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 CPNE1Q99829 537 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 ANKHQ9HCJ1 492 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 MKKSQ9NPJ1 570 aaPredicted RBP16.75■□□□□ 0.27
COL6A1-204ENST00000486023 MAP4K5Q9Y4K4 846 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 CCDC88CQ9P219 2028 aa16.75■□□□□ 0.27
COL6A1-204ENST00000486023 NSG1A0A0A6YYJ2 146 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 ZNF860A6NHJ4 632 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 NDUFS4O43181 175 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 VPS4BO75351 444 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 JRKO75564 520 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 SLC35G6P0C7Q6 338 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 CCDC166P0CW27 439 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 HNF4AP41235 474 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 GDF5P43026 501 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 POU4F1Q01851 419 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 FAM53BQ14153 422 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 PPP1R3AQ16821 1122 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 KBTBD12Q3ZCT8 623 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 PLEKHN1Q494U1 663 aaPredicted RBP16.74■□□□□ 0.27
COL6A1-204ENST00000486023 PRR30Q53SZ7 412 aaPredicted RBP16.74■□□□□ 0.27
COL6A1-204ENST00000486023 SLC6A19Q695T7 634 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 LINC00696Q6ZRV3 163 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 RAPH1Q70E73 1250 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 TMPRSS11BQ86T26 416 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 ZADH2Q8N4Q0 377 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 TBC1D19Q8N5T2 526 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 AMER2Q8N7J2 671 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 OR51Q1Q8NH59 317 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 FBF1Q8TES7 1133 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 MIB2Q96AX9 1013 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 ILKAPQ9H0C8 392 aaPredicted RBP16.74■□□□□ 0.27
COL6A1-204ENST00000486023 PRM3Q9NNZ6 103 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 C5AR2Q9P296 337 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 VPS4AQ9UN37 437 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 NOVA2Q9UNW9 492 aaKnown RBP16.74■□□□□ 0.27
COL6A1-204ENST00000486023 OARD1Q9Y530 152 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 PCM1Q15154 2024 aa16.74■□□□□ 0.27
COL6A1-204ENST00000486023 IGLV3-12A0A075B6K2 115 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 194.2 ms