RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 THAP11Q96EK4 314 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 NDNQ99608 321 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 SLX1AQ9BQ83 275 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 TUBB6Q9BUF5 446 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.24■□□□□ 0.19
SMC4-216ENST00000485645 TAS2R13Q9NYV9 303 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 ADAMTS6Q9UKP5 1117 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 PDE10AQ9Y233 779 aa16.24■□□□□ 0.19
SMC4-216ENST00000485645 CENPEQ02224 2701 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 JRKO75564 520 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 TTC4O95801 387 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 DCTP40126 519 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 SNRPNP63162 240 aaKnown RBP16.23■□□□□ 0.19
SMC4-216ENST00000485645 CSNK1G2P78368 415 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 CRYMQ14894 314 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 PPP1R7Q15435 360 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 INAQ16352 499 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 RNASEH2BQ5TBB1 312 aaKnown RBP16.23■□□□□ 0.19
SMC4-216ENST00000485645 MFSD4BQ5TF39 518 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 AGTRAPQ6RW13 159 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 C17orf64Q86WR6 236 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 MYO1HQ8N1T3 1032 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 CAMKVQ8NCB2 501 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 OR51Q1Q8NH59 317 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 PDLIM2Q96JY6 352 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 IMMP1LQ96LU5 166 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 OSBPL9Q96SU4 736 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 VN1R1Q9GZP7 353 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 PARVBQ9HBI1 364 aa16.23■□□□□ 0.19
SMC4-216ENST00000485645 FEZF1A0PJY2 475 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 SLC16A5O15375 505 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 WDPCPO95876 746 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 F10P00742 488 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 CYC1P08574 325 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 IL1RNP18510 177 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 CCND1P24385 295 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 EFNA3P52797 238 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 TIAL1Q01085 375 aaKnown RBP eCLIP16.22■□□□□ 0.19
SMC4-216ENST00000485645 DHX9Q08211 1270 aaKnown RBP16.22■□□□□ 0.19
SMC4-216ENST00000485645 SP140Q13342 867 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 NAE1Q13564 534 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 MINDY4Q4G0A6 757 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 ABHD17BQ5VST6 288 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 TMEM214Q6NUQ4 689 aaKnown RBP16.22■□□□□ 0.19
SMC4-216ENST00000485645 PAQR3Q6TCH7 311 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 MBOAT1Q6ZNC8 495 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 PRSS41Q7RTY9 318 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 SUN3Q8TAQ9 357 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 ALKBH8Q96BT7 664 aaKnown RBP16.22■□□□□ 0.19
SMC4-216ENST00000485645 CYTH2Q99418 400 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 MACROD1Q9BQ69 325 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 RNF32Q9H0A6 362 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 ATG10Q9H0Y0 220 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 KCNF1Q9H3M0 494 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 ANKHQ9HCJ1 492 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 C19orf25Q9UFG5 118 aaPredicted RBP16.22■□□□□ 0.19
SMC4-216ENST00000485645 ASIC3Q9UHC3 531 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 TEKT2Q9UIF3 430 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 SCN3AQ9NY46 2000 aa16.22■□□□□ 0.19
SMC4-216ENST00000485645 ITPR2Q14571 2701 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 STSP08842 583 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 HIST1H2AGP0C0S8 130 aaPredicted RBP16.21■□□□□ 0.19
SMC4-216ENST00000485645 MYBL2P10244 700 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 HIST1H2ADP20671 130 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 GRK3P35626 688 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 BCL6P41182 706 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 XCR1P46094 333 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 SPANXN3Q5MJ09 141 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 RBM20Q5T481 1227 aaKnown RBP16.21■□□□□ 0.19
SMC4-216ENST00000485645 ZNF324BQ6AW86 544 aaPredicted RBP16.21■□□□□ 0.19
SMC4-216ENST00000485645 HIBCHQ6NVY1 386 aaPredicted RBP16.21■□□□□ 0.19
SMC4-216ENST00000485645 LCTLQ6UWM7 567 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 CPEB2Q7Z5Q1 589 aaKnown RBP16.21■□□□□ 0.19
SMC4-216ENST00000485645 PCGF5Q86SE9 256 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 ASPGQ86U10 573 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 SLC35F6Q8N357 371 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 SLC13A3Q8WWT9 602 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 NR4A3Q92570 626 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 TM4SF19Q96DZ7 209 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 HIST1H2AHQ96KK5 128 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 TAAR6Q96RI8 345 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 HIST1H2AJQ99878 128 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 NAT9Q9BTE0 207 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 H2AFJQ9BTM1 129 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 FAM129AQ9BZQ8 928 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 STMN3Q9NZ72 180 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 HCN3Q9P1Z3 774 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 SH2B3Q9UQQ2 575 aa16.21■□□□□ 0.19
SMC4-216ENST00000485645 SCN2AQ99250 2005 aa16.21■□□□□ 0.18
SMC4-216ENST00000485645 CPAMD8Q8IZJ3 1885 aa16.2■□□□□ 0.18
SMC4-216ENST00000485645 IGHV3-20A0A0C4DH32 117 aa16.2■□□□□ 0.18
SMC4-216ENST00000485645 A0A1B0GUH1 482 aa16.2■□□□□ 0.18
SMC4-216ENST00000485645 PABPN1LA6NDY0 278 aaKnown RBP16.2■□□□□ 0.18
SMC4-216ENST00000485645 SGK494L7N484 410 aa16.2■□□□□ 0.18
SMC4-216ENST00000485645 DNALI1O14645 258 aaPredicted RBP16.2■□□□□ 0.18
SMC4-216ENST00000485645 ZSCAN12O43309 604 aa16.2■□□□□ 0.18
SMC4-216ENST00000485645 LCMT2O60294 686 aaKnown RBP16.2■□□□□ 0.18
SMC4-216ENST00000485645 BANF1O75531 89 aa16.2■□□□□ 0.18
SMC4-216ENST00000485645 SEC24DO94855 1032 aaPredicted RBP16.2■□□□□ 0.18
SMC4-216ENST00000485645 AHSGP02765 367 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms