RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 JAK3P52333 1124 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 COPB1P53618 953 aaKnown RBP3.96□□□□□ -1.78
VPS41-212ENST00000482217 FOXL2P58012 376 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 SKP1P63208 163 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 TLE3Q04726 772 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 CDK18Q07002 472 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 TROAPQ12815 778 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 FGFBP1Q14512 234 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 SLC18A3Q16572 532 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 SGCAQ16586 387 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 PCK2Q16822 640 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 RABGAP1LQ5R372 815 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 MANEAQ5SRI9 462 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 WSCD1Q658N2 575 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 TTC27Q6P3X3 843 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 NAPRTQ6XQN6 538 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 C11orf57Q6ZUT1 292 aaPredicted RBP3.96□□□□□ -1.78
VPS41-212ENST00000482217 USP50Q70EL3 339 aaPredicted RBP3.96□□□□□ -1.78
VPS41-212ENST00000482217 PHLDB2Q86SQ0 1253 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 EXOC3L1Q86VI1 746 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 CDKL3Q8IVW4 592 aaPredicted RBP3.96□□□□□ -1.78
VPS41-212ENST00000482217 SIAH3Q8IW03 269 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 ADGRF4Q8IZF3 695 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 RNF148Q8N7C7 305 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 TSPAN14Q8NG11 270 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 ANGPTL6Q8NI99 470 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 NDNFQ8TB73 568 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 PAQR8Q8TEZ7 354 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 NSMCE1Q8WV22 266 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 SCFD1Q8WVM8 642 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 OIT3Q8WWZ8 545 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 NPIPB3Q92617 1050 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 OSTF1Q92882 214 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 TNFRSF14Q92956 283 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 RIT1Q92963 219 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 ZG16BQ96DA0 208 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 FAM122AQ96E09 287 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 KAZALD1Q96I82 304 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 THOC3Q96J01 351 aaKnown RBP3.96□□□□□ -1.78
VPS41-212ENST00000482217 APOLD1Q96LR9 279 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 BTBD9Q96Q07 612 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 FYTTD1Q96QD9 318 aaKnown RBP3.96□□□□□ -1.78
VPS41-212ENST00000482217 EGFL8Q99944 293 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 SH3GL3Q99963 347 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 RTP3Q9BQQ7 232 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 ALKBH7Q9BT30 221 aaPredicted RBP3.96□□□□□ -1.78
VPS41-212ENST00000482217 SPATA16Q9BXB7 569 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 POTEKPQ9BYX7 375 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 PRRG3Q9BZD7 231 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 PKIBQ9C010 78 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 NAPBQ9H115 298 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 CDCP1Q9H5V8 836 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 NEK6Q9HC98 313 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 CPNE5Q9HCH3 593 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 YAE1D1Q9NRH1 226 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 SEMA4GQ9NTN9 838 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 ABHD10Q9NUJ1 306 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 AHSPQ9NZD4 102 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 DLGAP2Q9P1A6 1054 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 ARPP21Q9UBL0 812 aaPredicted RBP3.96□□□□□ -1.78
VPS41-212ENST00000482217 KLQ9UEF7 1012 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 POLLQ9UGP5 575 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 CRLS1Q9UJA2 301 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 ENPP5Q9UJA9 477 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 HAO1Q9UJM8 370 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 STAP1Q9ULZ2 295 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 SLC12A4Q9UP95 1085 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 ERVK-11Q9UQG0 969 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 ZNF148Q9UQR1 794 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 DTX4Q9Y2E6 619 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 WNT6Q9Y6F9 365 aa3.96□□□□□ -1.78
VPS41-212ENST00000482217 RAD50Q92878 1312 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 TRAV25A0A0B4J276 109 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 C1orf232A0A0U1RR37 186 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 C3orf70A6NLC5 250 aaPredicted RBP3.95□□□□□ -1.78
VPS41-212ENST00000482217 BECN2A8MW95 431 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 KBTBD13C9JR72 458 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 POC1B-GALNT4F8VUJ3 575 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 GOLGA8TH3BQL2 631 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 TEX46H3BTG2 121 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 KLF11O14901 512 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 LSM1O15116 133 aaKnown RBP3.95□□□□□ -1.78
VPS41-212ENST00000482217 RNF13O43567 381 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 ATG13O75143 517 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 PROP1O75360 226 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 VPS26AO75436 327 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 KRT36O76013 467 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 MYO1DO94832 1006 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 MBD3O95983 291 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 MYZAPP0CAP1 466 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 PRKACAP17612 351 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 HNF1AP20823 631 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 PAICSP22234 425 aaKnown RBP3.95□□□□□ -1.78
VPS41-212ENST00000482217 EPHB2P29323 1055 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 PPP2R1AP30153 589 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 CLK3P49761 638 aaKnown RBP3.95□□□□□ -1.78
VPS41-212ENST00000482217 RGS19P49795 217 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 RGS4P49798 205 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 GNAQP50148 359 aa3.95□□□□□ -1.78
VPS41-212ENST00000482217 STX17P56962 302 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms