RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 APRTP07741 180 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 HCKP08631 526 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 SBK2P0C263 348 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 CYP19A1P11511 503 aaPredicted RBP10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 ACO1P21399 889 aaKnown RBP10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 LHCGRP22888 699 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 ICAM3P32942 547 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 ADH7P40394 386 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 GPR3P46089 330 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 ATP4BP51164 291 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 ZNF155Q12901 538 aaPredicted RBP10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 SERTAD2Q14140 314 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 FASTKQ14296 549 aaKnown RBP10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 TBCEQ15813 527 aaPredicted RBP10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 GUCA2BQ16661 112 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 ATP13A5Q4VNC0 1218 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 CCDC157Q569K6 752 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 TFDP3Q5H9I0 405 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 ADGRF1Q5T601 910 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 DDI2Q5TDH0 399 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 MCOLN2Q8IZK6 566 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 OR11H4Q8NGC9 324 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 OR10J5Q8NHC4 309 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 HMGCLL1Q8TB92 370 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 GPKOWQ92917 476 aaPredicted RBP eCLIP10.05□□□□□ -0.83e-7■□□□□ 10.4
PRPF4B-206ENST00000481109 TMBIM1Q969X1 311 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 RFT1Q96AA3 541 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 MFSD3Q96ES6 412 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 ZNF558Q96NG5 402 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 FCRL3Q96P31 734 aaPredicted RBP10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 KATNB1Q9BVA0 655 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 SLC29A3Q9BZD2 475 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 SDCBP2Q9H190 292 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 CHRDQ9H2X0 955 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 EVA1AQ9H8M9 152 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 SLC28A3Q9HAS3 691 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 MKNK2Q9HBH9 465 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 SPON1Q9HCB6 807 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 DDX4Q9NQI0 724 aaKnown RBP10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 ABCB8Q9NUT2 735 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 C14orf105Q9NVL8 296 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 METTL1Q9UBP6 276 aaKnown RBP10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 SLC9A2Q9UBY0 812 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 FBXO10Q9UK96 956 aa10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 RBBP6Q7Z6E9 1792 aaKnown RBP10.05□□□□□ -0.8
PRPF4B-206ENST00000481109 TPP1O14773 563 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 CXCL14O95715 111 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 PLGP00747 810 aaPredicted RBP10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 CSF2P04141 144 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 CLUP10909 449 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 HOXD8P13378 290 aaPredicted RBP10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 ADRB3P13945 408 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 ARF4P18085 180 aaPredicted RBP10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 UBA1P22314 1058 aaKnown RBP10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 MPSTP25325 297 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 CCR7P32248 378 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 RAB5BP61020 215 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 DPYSL3Q14195 570 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 USP10Q14694 798 aaKnown RBP10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.04□□□□□ -0.82e-13■■□□□ 12.1
PRPF4B-206ENST00000481109 TIMM50Q3ZCQ8 353 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 RPL13AP3Q6NVV1 102 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 HAGHLQ6PII5 290 aaPredicted RBP10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 FAM111BQ6SJ93 734 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 MFSD7Q6UXD7 560 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 NLRC3Q7RTR2 1065 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 RAB44Q7Z6P3 723 aaPredicted RBP10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 KLBQ86Z14 1044 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 LCORLQ8N3X6 602 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 ARRDC1Q8N5I2 433 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 TRPV1Q8NER1 839 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 PRMT6Q96LA8 375 aaPredicted RBP10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 ERMAPQ96PL5 475 aaPredicted RBP10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 RBCK1Q9BYM8 510 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 GORASP2Q9H8Y8 452 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 SPACA1Q9HBV2 294 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 FBXL2Q9UKC9 423 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 D6RAR5 112 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 G3V2L1 256 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 H0YCG3 227 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 M0R082 166 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 LGALS8O00214 317 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 INPP4BO15327 924 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 TREHO43280 583 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 CABYRO75952 493 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 RECQL4O94761 1208 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 LPLP06858 475 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 RNH1P13489 461 aaKnown RBP10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 CYP4B1P13584 511 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 CBR1P16152 277 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 G0S2P27469 103 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 MSX1P28360 303 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 SDHAP31040 664 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 OR1G1P47890 313 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 GCLMP48507 274 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 GDF10P55107 478 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 ILF3Q12906 894 aaKnown RBP eCLIP10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 SYT16Q17RD7 645 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 HECTD3Q5T447 861 aa10.04□□□□□ -0.8
PRPF4B-206ENST00000481109 ZNF470Q6ECI4 717 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms