RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 FAM163BP0C2L3 166 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 CD72P21854 359 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 ABRAXAS2Q15018 415 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 NPTX1Q15818 432 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 ARSHQ5FYA8 562 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 TPRG1LQ5T0D9 272 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 OR4M2Q8NGB6 313 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 NTAN1Q96AB6 310 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 PCNX1Q96RV3 2341 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 GATA5Q9BWX5 397 aaPredicted RBP9.29□□□□□ -0.92
VEGFA-212ENST00000480614 Q9N2J8 555 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 CPQQ9Y646 472 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 CLCNKBP51801 687 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 USF2Q15853 346 aaPredicted RBP9.29□□□□□ -0.92
VEGFA-212ENST00000480614 FRG2Q64ET8 278 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 EEF1DP3Q658K8 133 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 REEP3Q6NUK4 255 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 LRRTM4Q86VH4 590 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 ERI1Q8IV48 349 aaKnown RBP9.29□□□□□ -0.92
VEGFA-212ENST00000480614 FRG2BQ96QU4 278 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 PTGES2Q9H7Z7 377 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 PCDHGA2Q9Y5H1 932 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 MT-CYBP00156 380 aaPredicted RBP9.29□□□□□ -0.92
VEGFA-212ENST00000480614 C4BPAP04003 597 aaKnown RBP9.29□□□□□ -0.92
VEGFA-212ENST00000480614 MATN1P21941 496 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 CMKLR1Q99788 373 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 FAM120CQ9NX05 1096 aaKnown RBP9.29□□□□□ -0.92
VEGFA-212ENST00000480614 ALPK2Q86TB3 2170 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 PFKLP17858 780 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 PPM1JQ5JR12 505 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 RASGRP3Q8IV61 690 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 MRPL41Q8IXM3 137 aaKnown RBP9.29□□□□□ -0.92
VEGFA-212ENST00000480614 JAGN1Q8N5M9 183 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 FAM86B1Q8N7N1 296 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 PMEPA1Q969W9 287 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 FER1L5A0AVI2 2057 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 CLIC1O00299 241 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 NDUFS4O43181 175 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 LCN1P31025 176 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 NRIP1P48552 1158 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 GRK1Q15835 563 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 ARHGAP40Q5TG30 622 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 RAB12Q6IQ22 244 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 LINGO4Q6UY18 593 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 ZBTB8BQ8NAP8 495 aaPredicted RBP9.29□□□□□ -0.92
VEGFA-212ENST00000480614 OR7D4Q8NG98 312 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 ELP5Q8TE02 316 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 MAFIPQ8WZ33 124 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 KIAA1143Q96AT1 154 aaPredicted RBP9.29□□□□□ -0.92
VEGFA-212ENST00000480614 G6PC3Q9BUM1 346 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 CA12O43570 354 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 ADH1BP00325 375 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 IL3P08700 152 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 AQP4P55087 323 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 SH3PXD2AQ5TCZ1 1133 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 ZNF781Q8N8C0 355 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 COL21A1Q96P44 957 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 SLC30A2Q9BRI3 323 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 XKR8Q9H6D3 395 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 BMP8BP34820 402 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 TMEM214Q6NUQ4 689 aaKnown RBP9.29□□□□□ -0.92
VEGFA-212ENST00000480614 RFWD3Q6PCD5 774 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 BMP8AQ7Z5Y6 402 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 SLC9B2Q86UD5 537 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 GKN2Q86XP6 184 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 C1orf127Q8N9H9 656 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 TM9SF3Q9HD45 589 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 IST1P53990 364 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 SLC10A7Q0GE19 358 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 CYP1B1Q16678 543 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 LRRC57Q8N9N7 239 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 FCRL5Q96RD9 977 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 B3GNT5Q9BYG0 378 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.29□□□□□ -0.92
VEGFA-212ENST00000480614 DCSTAMPQ9H295 470 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 SLC32A1Q9H598 525 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 RAB9BQ9NP90 201 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 ANKRD36CQ5JPF3 1778 aa9.29□□□□□ -0.92
VEGFA-212ENST00000480614 OR4F21O95013 312 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 SPATA31D3P0C874 917 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 POU2F1P14859 743 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 HRH2P25021 359 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 MAGEA8P43361 318 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 EOGTQ5NDL2 527 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 RNF220Q5VTB9 566 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 SPATA31D4Q6ZUB0 917 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 SHKBP1Q8TBC3 707 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 ADAD1Q96M93 576 aaKnown RBP9.28□□□□□ -0.92
VEGFA-212ENST00000480614 SIRPGQ9P1W8 387 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 KCNN3Q9UGI6 736 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 MAFBQ9Y5Q3 323 aaPredicted RBP9.28□□□□□ -0.92
VEGFA-212ENST00000480614 ATG12O94817 140 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 IMPDH1P20839 514 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 TCEA1P23193 301 aaKnown RBP9.28□□□□□ -0.92
VEGFA-212ENST00000480614 FMO3P31513 532 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 RGS19P49795 217 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 MTPNP58546 118 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 S100A10P60903 97 aa9.28□□□□□ -0.92
VEGFA-212ENST00000480614 AIMP2Q13155 320 aaKnown RBP9.28□□□□□ -0.92
VEGFA-212ENST00000480614 KREMEN2Q8NCW0 462 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms