RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 ART3Q13508 389 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 GPR18Q14330 331 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 RBBP5Q15291 538 aaKnown RBP10.03□□□□□ -0.8
LINC00173-203ENST00000480237 KIF26BQ2KJY2 2108 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 LYSMD4Q5XG99 296 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 ACSM2BQ68CK6 577 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 REP15Q6BDI9 236 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 IYDQ6PHW0 289 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 C16orf89Q6UX73 402 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 TMIGD1Q6UXZ0 262 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 OR4E2Q8NGC2 313 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 C1orf216Q8TAB5 229 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 LMX1AQ8TE12 382 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 GAB3Q8WWW8 586 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 SLC45A3Q96JT2 553 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 APOLD1Q96LR9 279 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 ZBTB18Q99592 522 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 NPAS2Q99743 824 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 CADM1Q9BY67 442 aaKnown RBP10.03□□□□□ -0.8
LINC00173-203ENST00000480237 MRPL1Q9BYD6 325 aaKnown RBP10.03□□□□□ -0.8
LINC00173-203ENST00000480237 C1orf21Q9H246 121 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 MRPS30Q9NP92 439 aaKnown RBP10.03□□□□□ -0.8
LINC00173-203ENST00000480237 ATP13A2Q9NQ11 1180 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 DMRT3Q9NQL9 472 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 NMRK1Q9NWW6 199 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 NDE1Q9NXR1 346 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 ASIC5Q9NY37 505 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 SPASTQ9UBP0 616 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 VPS29Q9UBQ0 182 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 TMED5Q9Y3A6 229 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 TTC28Q96AY4 2481 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 VPS13AQ96RL7 3174 aa10.03□□□□□ -0.8
LINC00173-203ENST00000480237 GSAPA4D1B5 854 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 ANKDD1BA6NHY2 528 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 NPIPB8E9PQR5 432 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 H7BY64 318 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 MRASO14807 208 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 VILLO15195 856 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 LILRA1O75019 489 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 TDGF1P13385 188 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 XRCC1P18887 633 aaPredicted RBP10.02□□□□□ -0.81
LINC00173-203ENST00000480237 ITGAXP20702 1163 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 PEBP1P30086 187 aaKnown RBP10.02□□□□□ -0.81
LINC00173-203ENST00000480237 GRK3P35626 688 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 PGM1P36871 562 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 POLR2JP52435 117 aaKnown RBP10.02□□□□□ -0.81
LINC00173-203ENST00000480237 UFM1P61960 85 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 HNRNPKP61978 463 aaKnown RBP eCLIP10.02□□□□□ -0.81
LINC00173-203ENST00000480237 UBE2IP63279 158 aaKnown RBP10.02□□□□□ -0.81
LINC00173-203ENST00000480237 YBX1P67809 324 aaKnown RBP10.02□□□□□ -0.81
LINC00173-203ENST00000480237 SLC25A3Q00325 362 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 PRDX1Q06830 199 aaKnown RBP10.02□□□□□ -0.81
LINC00173-203ENST00000480237 GRIK2Q13002 908 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 SRSF5Q13243 272 aaKnown RBP10.02□□□□□ -0.81
LINC00173-203ENST00000480237 PTGR1Q14914 329 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 SF1Q15637 639 aaKnown RBP10.02□□□□□ -0.81
LINC00173-203ENST00000480237 SPIN4Q56A73 249 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 PMS2CLQ68D20 193 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 MRPL14Q6P1L8 145 aaKnown RBP10.02□□□□□ -0.81
LINC00173-203ENST00000480237 SLC9B2Q86UD5 537 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 FUNDC1Q8IVP5 155 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 C1orf210Q8IVY1 113 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.02□□□□□ -0.81
LINC00173-203ENST00000480237 FAM9CQ8IZT9 166 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 NAGSQ8N159 534 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 AVL9Q8NBF6 648 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 KYQ8NBH2 561 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 ZNF740Q8NDX6 193 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 ZNF548Q8NEK5 533 aaPredicted RBP10.02□□□□□ -0.81
LINC00173-203ENST00000480237 GPR156Q8NFN8 814 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 ABHD11Q8NFV4 315 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 OR2A1Q8NGT9 310 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 OR10G6Q8NH81 332 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 SPDL1Q96EA4 605 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 APIPQ96GX9 242 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 PRAP1Q96NZ9 151 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 EBPLQ9BY08 206 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 DPY30Q9C005 99 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 EFCAB1Q9HAE3 211 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 SLC40A1Q9NP59 571 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 SPHK1Q9NYA1 384 aa10.02□□□□□ -0.81
LINC00173-203ENST00000480237 RUVBL1Q9Y265 456 aaKnown RBP10.02□□□□□ -0.81
LINC00173-203ENST00000480237 FAM234BA2RU67 622 aa10.01□□□□□ -0.81
LINC00173-203ENST00000480237 FOXE1O00358 373 aaPredicted RBP10.01□□□□□ -0.81
LINC00173-203ENST00000480237 GSC2O15499 205 aa10.01□□□□□ -0.81
LINC00173-203ENST00000480237 AQP9O43315 295 aa10.01□□□□□ -0.81
LINC00173-203ENST00000480237 NRP2O60462 931 aa10.01□□□□□ -0.81
LINC00173-203ENST00000480237 SDC3O75056 442 aa10.01□□□□□ -0.81
LINC00173-203ENST00000480237 PRPS2P11908 318 aa10.01□□□□□ -0.81
LINC00173-203ENST00000480237 BCKDHAP12694 445 aa10.01□□□□□ -0.81
LINC00173-203ENST00000480237 GNSP15586 552 aa10.01□□□□□ -0.81
LINC00173-203ENST00000480237 AMD1P17707 334 aa10.01□□□□□ -0.81
LINC00173-203ENST00000480237 JAK1P23458 1154 aa10.01□□□□□ -0.81
LINC00173-203ENST00000480237 CPOXP36551 454 aa10.01□□□□□ -0.81
LINC00173-203ENST00000480237 PIK3CBP42338 1070 aa10.01□□□□□ -0.81
LINC00173-203ENST00000480237 CYP4F2P78329 520 aa10.01□□□□□ -0.81
LINC00173-203ENST00000480237 ABATP80404 500 aa10.01□□□□□ -0.81
LINC00173-203ENST00000480237 HHEXQ03014 270 aa10.01□□□□□ -0.81
LINC00173-203ENST00000480237 BIRC2Q13490 618 aa10.01□□□□□ -0.81
LINC00173-203ENST00000480237 RCAN2Q14206 197 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms