RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 P2RX6O15547 441 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 TTC4O95801 387 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 HEXBP07686 556 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 IVDP26440 423 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 RGS4P49798 205 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 EMP2P54851 167 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 TBPL1P62380 186 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 RELAQ04206 551 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 DHX9Q08211 1270 aaKnown RBP13.62□□□□□ -0.23
ATG4B-218ENST00000479554 NDUFA9Q16795 377 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 PCGF5Q86SE9 256 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 PLD3Q8IV08 490 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 PALM2Q8IXS6 379 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 LRRC56Q8IYG6 542 aaPredicted RBP13.62□□□□□ -0.23
ATG4B-218ENST00000479554 AMER3Q8N944 861 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 FBXO25Q8TCJ0 367 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 CNDP1Q96KN2 507 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 NAT9Q9BTE0 207 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 MKKSQ9NPJ1 570 aaPredicted RBP13.62□□□□□ -0.23
ATG4B-218ENST00000479554 TAS2R13Q9NYV9 303 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 NBPF19A0A087WUL8 3843 aa13.62□□□□□ -0.23
ATG4B-218ENST00000479554 NSG1A0A0A6YYJ2 146 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 IDSB3KWA1 339 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 H7BY64 318 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 FOXS1O43638 330 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 BANF1O75531 89 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 C8GP07360 202 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 COX6A1P12074 109 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 HRH2P25021 359 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 CXCR2P25025 360 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 SLC26A3P40879 764 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 EEF1A2Q05639 463 aaKnown RBP13.61□□□□□ -0.23
ATG4B-218ENST00000479554 Q0VFX4 171 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 SP140Q13342 867 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 MFAP5Q13361 173 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 ELOAQ14241 798 aaKnown RBP13.61□□□□□ -0.23
ATG4B-218ENST00000479554 CRB2Q5IJ48 1285 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 SPANXN3Q5MJ09 141 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 ATG9BQ674R7 924 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 FAAH2Q6GMR7 532 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 ISLR2Q6UXK2 745 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 LINC00696Q6ZRV3 163 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 CEP128Q6ZU80 1094 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 LAPTM4BQ86VI4 370 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 KBTBD2Q8IY47 623 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 MYO1HQ8N1T3 1032 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 ARHGEF39Q8N4T4 335 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 DNAJB14Q8TBM8 379 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 MCOLN3Q8TDD5 553 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 EEF1AKMT1Q8WVE0 214 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 PRAP1Q96NZ9 151 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 AGPAT4Q9NRZ5 378 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 ADAMTS6Q9UKP5 1117 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 NTNG1Q9Y2I2 539 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 ESPL1Q14674 2120 aa13.61□□□□□ -0.23
ATG4B-218ENST00000479554 HEATR5BQ9P2D3 2071 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 ANKUB1A6NFN9 424 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 PCDH17O14917 1159 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 CBX6O95503 412 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 STATHP02808 62 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 TSFMP43897 325 aaKnown RBP13.6□□□□□ -0.23
ATG4B-218ENST00000479554 AVPR1BP47901 424 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 ITGA8P53708 1063 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 RPS15AP62244 130 aaKnown RBP13.6□□□□□ -0.23
ATG4B-218ENST00000479554 CDC16Q13042 620 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 FAM53BQ14153 422 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 ZNF169Q14929 603 aaPredicted RBP13.6□□□□□ -0.23
ATG4B-218ENST00000479554 SLMAPQ14BN4 828 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 BBS9Q3SYG4 887 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 MSS51Q4VC12 460 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 RBM20Q5T481 1227 aaKnown RBP13.6□□□□□ -0.23
ATG4B-218ENST00000479554 B3GNTL1Q67FW5 361 aaPredicted RBP13.6□□□□□ -0.23
ATG4B-218ENST00000479554 PAQR3Q6TCH7 311 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 KIAA0408Q6ZU52 694 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 NDUFAF7Q7L592 441 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 CNTN4Q8IWV2 1026 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 LINGO1Q96FE5 620 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 CCDC138Q96M89 665 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 TXLNGYQ9BZA5 131 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 TGIF2Q9GZN2 237 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 PCBD2Q9H0N5 130 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 PARVBQ9HBI1 364 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 TMEM184CQ9NVA4 438 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 RIC8BQ9NVN3 520 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 PLEKHB1Q9UF11 243 aaPredicted RBP13.6□□□□□ -0.23
ATG4B-218ENST00000479554 PDE10AQ9Y233 779 aa13.6□□□□□ -0.23
ATG4B-218ENST00000479554 DOCK10Q96BY6 2186 aa13.59□□□□□ -0.23
ATG4B-218ENST00000479554 SPTBN1Q01082 2364 aaKnown RBP13.59□□□□□ -0.23
ATG4B-218ENST00000479554 MDC1Q14676 2089 aaKnown RBP13.59□□□□□ -0.23
ATG4B-218ENST00000479554 IGHV1-45A0A0A0MS14 117 aa13.59□□□□□ -0.23
ATG4B-218ENST00000479554 A0A1W2PQ72 361 aa13.59□□□□□ -0.23
ATG4B-218ENST00000479554 PABPN1LA6NDY0 278 aaKnown RBP13.59□□□□□ -0.23
ATG4B-218ENST00000479554 SLC16A5O15375 505 aa13.59□□□□□ -0.23
ATG4B-218ENST00000479554 DDAH2O95865 285 aa13.59□□□□□ -0.23
ATG4B-218ENST00000479554 PRR35P0CG20 571 aa13.59□□□□□ -0.23
ATG4B-218ENST00000479554 RNF224P0DH78 156 aa13.59□□□□□ -0.23
ATG4B-218ENST00000479554 FDXRP22570 491 aa13.59□□□□□ -0.23
ATG4B-218ENST00000479554 CCND1P24385 295 aa13.59□□□□□ -0.23
ATG4B-218ENST00000479554 GABRB3P28472 473 aa13.59□□□□□ -0.23
ATG4B-218ENST00000479554 CDKN2DP55273 166 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms