RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 RNF150Q9ULK6 438 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 SNX7Q9UNH6 387 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 COL4A1P02462 1669 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 AKAP11Q9UKA4 1901 aa3.73□□□□□ -1.81
CDC42BPA-212ENST00000478573 MAP3K15Q6ZN16 1313 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 MYH7P12883 1935 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 MAST2Q6P0Q8 1798 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 IGLV5-45A0A087WSX0 123 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 ERVV-1B6SEH8 477 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 E9PI62 339 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 C16orf97H3BN30 126 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 GAPDHSO14556 408 aaPredicted RBP3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 IFIT3O14879 490 aaKnown RBP3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 AP5Z1O43299 807 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 STX6O43752 255 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 SLU7O95391 586 aaKnown RBP3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 TGDSO95455 350 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 TBX6O95947 436 aaPredicted RBP3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 FAM58BPP0C7Q3 252 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 PLA2G4BP0C869 781 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 NR2C2P49116 596 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 ALDH3A2P51648 485 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 MAPK12P53778 367 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 CX3CL1P78423 397 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 DLK1P80370 383 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 MBTD1Q05BQ5 628 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 TYSND1Q2T9J0 566 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 ELFN2Q5R3F8 820 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 SFMBT2Q5VUG0 894 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 SHEQ5VZ18 495 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 MFSD6Q6ZSS7 791 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 NUP54Q7Z3B4 507 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 DSG4Q86SJ6 1040 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 SLC9B2Q86UD5 537 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 NPEPL1Q8NDH3 523 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 OR13J1Q8NGT2 312 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 GRAPLQ8TC17 118 aaPredicted RBP3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 KCNE4Q8WWG9 221 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 SPATA33Q96N06 139 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 DUX3Q96PT4 197 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 FNBP1Q96RU3 617 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 INTS14Q96SY0 518 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 GPATCH1Q9BRR8 931 aaKnown RBP3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 KATNB1Q9BVA0 655 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 RSPH9Q9H1X1 276 aaPredicted RBP3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 OLFML3Q9NRN5 406 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 ZFP57Q9NU63 452 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 SPHK1Q9NYA1 384 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 MTUS1Q9ULD2 1270 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 TRIM17Q9Y577 477 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 ABCC12Q96J65 1359 aa3.72□□□□□ -1.81
CDC42BPA-212ENST00000478573 CDK5RAP2Q96SN8 1893 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 A0A1W2PPK0 400 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 A0A1W2PRB8 838 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 C5orf52A6NGY3 159 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 DNM1LO00429 736 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 SLC30A4O14863 429 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 ACSL3O95573 720 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 HAPLN1P10915 354 aaPredicted RBP3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 VDRP11473 427 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 TCF4P15884 667 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 ACAT1P24752 427 aaKnown RBP3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 TIA1P31483 386 aaKnown RBP eCLIP3.71□□□□□ -1.821e-5■□□□□ 11
CDC42BPA-212ENST00000478573 VEGFCP49767 419 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 CLDN15P56746 228 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 UBASH3AP57075 661 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 RIPK4P57078 832 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 ERVK11-1P61568 191 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 PTK6Q13882 451 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 NPTX1Q15818 432 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 CA9Q16790 459 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 MEP1BQ16820 701 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 CDO1Q16878 200 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 HSP90AB3PQ58FF7 597 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 SIRPB2Q5JXA9 342 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 PDSS1Q5T2R2 415 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 PRR5LQ6MZQ0 368 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 NOTUMQ6P988 496 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 SHQ1Q6PI26 577 aaKnown RBP3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 ZNF852Q6ZMS4 543 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 KIF6Q6ZMV9 814 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 KCTD8Q6ZWB6 473 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 SMIM5Q71RC9 77 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 SPATA21Q7Z572 469 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 PLD3Q8IV08 490 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 SIX6OS1Q8N1H7 587 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 BMPERQ8N8U9 685 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 CNBD1Q8NA66 436 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 IRGQQ8WZA9 623 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 RAD54LQ92698 747 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 CCDC114Q96M63 670 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 DESI2Q9BSY9 194 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 TRMT61BQ9BVS5 477 aaKnown RBP3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 NYXQ9GZU5 481 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 COPS7BQ9H9Q2 264 aaPredicted RBP3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 ZNF334Q9HCZ1 680 aaPredicted RBP3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 DNAJC4Q9NNZ3 241 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 GKN1Q9NS71 199 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 SLC38A7Q9NVC3 462 aa3.71□□□□□ -1.82
CDC42BPA-212ENST00000478573 DDX43Q9NXZ2 648 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms