RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 EPHA5P54756 1037 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 SLC35A2P78381 396 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 STX4Q12846 297 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 PRKAA1Q13131 559 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 CCINQ13939 588 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 ZIK1Q3SY52 487 aaPredicted RBP12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 RAB6CQ53S08 254 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 KIAA0319Q5VV43 1072 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 GK5Q6ZS86 529 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 SPPL2CQ8IUH8 684 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 ZNF431Q8TF32 576 aaPredicted RBP12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 SFT2D1Q8WV19 159 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 FAF2Q96CS3 445 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 TRMT61AQ96FX7 289 aaKnown RBP12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 ZBTB18Q99592 522 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 PAAF1Q9BRP4 392 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 PDCD10Q9BUL8 212 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 RAB6CQ9H0N0 254 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 SMYD2Q9NRG4 433 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 GPATCH2LQ9NWQ4 482 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 RCOR3Q9P2K3 495 aaPredicted RBP12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 MID2Q9UJV3 735 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 AP1M2Q9Y6Q5 423 aa12.28□□□□□ -0.44
RTFDC1-207ENST00000477573 TRIM13O60858 407 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 ERN1O75460 977 aaKnown RBP12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 BEST1O76090 585 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 DNTTP04053 509 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 CYP17A1P05093 508 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 ACAA1P09110 424 aaPredicted RBP12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 LTA4HP09960 611 aaKnown RBP12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 TYMPP19971 482 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 CD6P30203 668 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 CA5AP35218 305 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 ARL4AP40617 200 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 VEGFCP49767 419 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 TBX4P57082 545 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 CHAF1BQ13112 559 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 SEMA5AQ13591 1074 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 TATDN3Q17R31 274 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 PAN3Q58A45 887 aaKnown RBP12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 TOR1AIP1Q5JTV8 583 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 CASC4Q6P4E1 433 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 OR52K2Q8NGK3 314 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 ADAM32Q8TC27 787 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 ZC3HAV1LQ96H79 300 aaKnown RBP12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 CMTM3Q96MX0 182 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 SLC2A13Q96QE2 648 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 P2RY13Q9BPV8 354 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 TCEAL7Q9BRU2 100 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 TBCDQ9BTW9 1192 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 ITPAQ9BY32 194 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 ZYG11BQ9C0D3 744 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 BTBD1Q9H0C5 482 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 ACOT13Q9NPJ3 140 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 ERVK-18Q9QC07 812 aa12.27□□□□□ -0.45
RTFDC1-207ENST00000477573 OR2A25A4D2G3 310 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 TTLL8A6PVC2 850 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 WASHC1A8K0Z3 465 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 GRID2O43424 1007 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 SOX30O94993 753 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 SNRPB2P08579 225 aaKnown RBP12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 IGFBP6P24592 240 aaPredicted RBP12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 CYP2F1P24903 491 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 CTSKP43235 329 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 CSTF1Q05048 431 aaKnown RBP12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 DGCR6Q14129 220 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 PFKFB4Q16877 469 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 TRIM60Q495X7 471 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 INTS6LQ5JSJ4 861 aaKnown RBP12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 CDKL4Q5MAI5 379 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 OVOS1Q6IE37 1185 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 SLC25A25Q6KCM7 469 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 ERICH5Q6P6B1 374 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 BHLHB9Q6PI77 547 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 TBPL2Q6SJ96 375 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 BNIPLQ7Z465 357 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 MILR1Q7Z6M3 343 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 CAMKVQ8NCB2 501 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 PCDH19Q8TAB3 1148 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 ADAMTS19Q8TE59 1207 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 NT5C3BQ969T7 300 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 SUSD3Q96L08 255 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 SMOQ99835 787 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 TRIM62Q9BVG3 475 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 ULBP1Q9BZM6 244 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 ALX4Q9H161 411 aaPredicted RBP12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 C11orf49Q9H6J7 331 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 SCN3BQ9NY72 215 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 A0A0U1RQS6 177 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 BBIP1A8MTZ0 92 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 WWP2O00308 870 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 PRMT3O60678 531 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 RBBP9O75884 186 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 PGLSO95336 258 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 ADH1CP00326 375 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 ALDOAP04075 364 aaKnown RBP12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 APOA4P06727 396 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 FCER2P06734 321 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 CD63P08962 238 aa12.26□□□□□ -0.45
RTFDC1-207ENST00000477573 ZNF806P0C7X5 589 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms