RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 SEC61BP60468 96 aaKnown RBP2.38□□□□□ -2.03
XRN1-211ENST00000477237 RAB14P61106 215 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 EEF1A1P68104 462 aaKnown RBP2.38□□□□□ -2.03
XRN1-211ENST00000477237 PDE1BQ01064 536 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 CREB5Q02930 508 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 RPA4Q13156 261 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 ZNF177Q13360 481 aaPredicted RBP2.38□□□□□ -2.03
XRN1-211ENST00000477237 GPM6BQ13491 265 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 TRA2AQ13595 282 aaKnown RBP eCLIP2.38□□□□□ -2.03
XRN1-211ENST00000477237 VEPH1Q14D04 833 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 HSPB2Q16082 182 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 SLC18A3Q16572 532 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 PARP6Q2NL67 630 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 SMU1Q2TAY7 513 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 HFEQ30201 348 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 CTXN3Q4LDR2 81 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 SLC9B1Q4ZJI4 515 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 FAM98BQ52LJ0 330 aaKnown RBP2.38□□□□□ -2.03
XRN1-211ENST00000477237 HERC4Q5GLZ8 1057 aaPredicted RBP2.38□□□□□ -2.03
XRN1-211ENST00000477237 SAPCD1Q5SSQ6 148 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 CLVS2Q5SYC1 327 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 SPATA46Q5T0L3 261 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 THEM4Q5T1C6 240 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 SLC9C2Q5TAH2 1124 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 EEF1A1P5Q5VTE0 462 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 ACAD10Q6JQN1 1059 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 NOTUMQ6P988 496 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 ZNF790Q6PG37 636 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 KIF6Q6ZMV9 814 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 UTS2BQ765I0 119 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 CACNA2D4Q7Z3S7 1137 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 ADGRA1Q86SQ6 560 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 MOGAT3Q86VF5 341 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 TPRA1Q86W33 373 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 ZNF677Q86XU0 584 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 MAP7D3Q8IWC1 876 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 CNTN4Q8IWV2 1026 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 THNSL1Q8IYQ7 743 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 ST13P4Q8IZP2 240 aaPredicted RBP2.38□□□□□ -2.03
XRN1-211ENST00000477237 CRYBG2Q8N1P7 616 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 SLC43A2Q8N370 569 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 BBS5Q8N3I7 341 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 TCAIMQ8N3R3 496 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 CSGALNACT2Q8N6G5 542 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 OR10Z1Q8NGY1 313 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 DEPDC1BQ8WUY9 529 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 TMEM170AQ8WVE7 144 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 ASZ1Q8WWH4 475 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 ZKSCAN4Q969J2 545 aaPredicted RBP2.38□□□□□ -2.03
XRN1-211ENST00000477237 RNFT2Q96EX2 444 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 CHMP6Q96FZ7 201 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 IFT74Q96LB3 600 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 OPALINQ96PE5 141 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 FAM111AQ96PZ2 611 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 PRAM1Q96QH2 718 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 RAD9AQ99638 391 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 VGLL1Q99990 258 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 CCDC77Q9BR77 488 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 FRMD8P1Q9BZ68 369 aaPredicted RBP2.38□□□□□ -2.03
XRN1-211ENST00000477237 NUF2Q9BZD4 464 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 GPR61Q9BZJ8 451 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 NDST4Q9H3R1 872 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 TMEM206Q9H813 350 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 NEK6Q9HC98 313 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 IL26Q9NPH9 171 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 NRBP2Q9NSY0 501 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 TMEM30AQ9NV96 361 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 TMEM160Q9NX00 188 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 SOHLH2Q9NX45 425 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 TMOD2Q9NZR1 351 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 VPS54Q9P1Q0 977 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 COPG2Q9UBF2 871 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 MAD2L2Q9UI95 211 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 CORO1CQ9ULV4 474 aaPredicted RBP2.38□□□□□ -2.03
XRN1-211ENST00000477237 MRPS28Q9Y2Q9 187 aaKnown RBP2.38□□□□□ -2.03
XRN1-211ENST00000477237 OR2W1Q9Y3N9 320 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 FAM32AQ9Y421 112 aaKnown RBP2.38□□□□□ -2.03
XRN1-211ENST00000477237 CCL27Q9Y4X3 112 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 USP16Q9Y5T5 823 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 A3GALT2U3KPV4 340 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 ELP1O95163 1332 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 FRMPD4Q14CM0 1322 aa2.38□□□□□ -2.03
XRN1-211ENST00000477237 VIRMAQ69YN4 1812 aaKnown RBP2.38□□□□□ -2.03
XRN1-211ENST00000477237 THOC2Q8NI27 1593 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 KIF27Q86VH2 1401 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 A0A0U1RQV5 110 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 A0A1B0GTQ1 180 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 NDUFAF8A1L188 74 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 GSAPA4D1B5 854 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 A4D1N5 150 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 MFSD2BA6NFX1 497 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 A8MU10 97 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 XPO1O14980 1071 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 PGRMC2O15173 223 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 HCRTR2O43614 444 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 GATCO43716 136 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 NUDT21O43809 227 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 STX10O60499 249 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 TADA2AO75478 443 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 CRCPO75575 148 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms