RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ZNF740Q8NDX6 193 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 GPR150Q8NGU9 434 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 KIAA1191Q96A73 305 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 RAD51AP1Q96B01 352 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 OMA1Q96E52 524 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ZNF558Q96NG5 402 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 SLC9A7Q96T83 725 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 MICU1Q9BPX6 476 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 RPP25Q9BUL9 199 aaKnown RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 QRSL1Q9H0R6 528 aaKnown RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 EHD1Q9H4M9 534 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 VRTNQ9H8Y1 702 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 C1orf109Q9NX04 203 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 FBXO10Q9UK96 956 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 PCTPQ9UKL6 214 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 SNX6Q9UNH7 406 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 UNC13CQ8NB66 2214 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 CCRL2O00421 344 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 MYL12BO14950 172 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 IDH3BO43837 385 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 SLC28A2O43868 658 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 NOS1APO75052 506 aaPredicted RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 CPNE3O75131 537 aaKnown RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 PRKRAO75569 313 aaKnown RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 MED26O95402 600 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 NR2F1P10589 423 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 C7P10643 843 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 MTHFD2P13995 350 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 CBLP22681 906 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 GPR1P46091 355 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ATP12AP54707 1039 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ATP6V0D1P61421 351 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 IL10RBQ08334 325 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 CAMK1Q14012 370 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 INO80DQ53TQ3 878 aaPredicted RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 CATSPEREQ5SY80 951 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 FCRLBQ6BAA4 426 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 KDELC1Q6UW63 502 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 DPY19L3Q6ZPD9 716 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 Q6ZSR9 355 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 TMEM179BQ7Z7N9 219 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 RNF130Q86XS8 419 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 SFTPA1Q8IWL2 248 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 LGI4Q8N135 537 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ELMOD1Q8N336 334 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 FAM83FQ8NEG4 500 aaPredicted RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ARRDC2Q8TBH0 407 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 KCTD13Q8WZ19 329 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 SLC9A6Q92581 669 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 DIRAS2Q96HU8 199 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 TRNT1Q96Q11 434 aaKnown RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 CCM2Q9BSQ5 444 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 HTATIP2Q9BUP3 242 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 SEZ6LQ9BYH1 1024 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 MMP28Q9H239 520 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 CARS2Q9HA77 564 aaKnown RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 FAM118AQ9NWS6 357 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ADPRHL2Q9NX46 363 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 MARCH5Q9NX47 278 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ZNF624Q9P2J8 865 aaPredicted RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 CCL26Q9Y258 94 aa4.83□□□□□ -1.64
CCDC39-204ENST00000476379 OAS3Q9Y6K5 1087 aaKnown RBP4.83□□□□□ -1.64
CCDC39-204ENST00000476379 ZFHX4Q86UP3 3567 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TRAV19A0A0A6YYK7 116 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 FAM234BA2RU67 622 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TMEM202A6NGA9 273 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 PSMD9O00233 223 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 SLC31A1O15431 190 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 DENRO43583 198 aaKnown RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 PDE9AO76083 593 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TSPAN19P0C672 248 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ELFN1P0C7U0 828 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 CYP2A7P20853 494 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 NOS3P29474 1203 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 PRDX6P30041 224 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 RPL9P32969 192 aaKnown RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 SEC13P55735 322 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 C5orf22Q49AR2 442 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 FNDC3BQ53EP0 1204 aaKnown RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 AKIRIN2Q53H80 203 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 LIPKQ5VXJ0 399 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 OTPQ5XKR4 325 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ERAP2Q6P179 960 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 KIAA0408Q6ZU52 694 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ZNF551Q7Z340 670 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 C10orf111Q8N326 155 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 OR51L1Q8NGJ5 315 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 CD200R1Q8TD46 325 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 AP2M1Q96CW1 435 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 HAPLN3Q96S86 360 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 FEVQ99581 238 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TRMOQ9BU70 441 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ATP13A3Q9H7F0 1226 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TPT1P8Q9HAU6 139 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TREX1Q9NSU2 369 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 MRPL15Q9P015 296 aaKnown RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 HSFX1Q9UBD0 423 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 B4GALT6Q9UBX8 382 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 PSME2Q9UL46 239 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 PIEZO2Q9H5I5 2752 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms