RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ZCCHC23Q6ZST2 131 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 SPATA21Q7Z572 469 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 WDR75Q8IWA0 830 aaKnown RBP15.01□□□□□ -0.01
CPSF3-203ENST00000475482 HOMEZQ8IX15 550 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 TCAIMQ8N3R3 496 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 AFAP1L2Q8N4X5 818 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 CCNYL1Q8N7R7 359 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 OR6Y1Q8NGX8 325 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 OR1L3Q8NH93 324 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 EXT2Q93063 718 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 ELAC2Q9BQ52 826 aaKnown RBP15.01□□□□□ -0.01
CPSF3-203ENST00000475482 GATA5Q9BWX5 397 aaPredicted RBP15.01□□□□□ -0.01
CPSF3-203ENST00000475482 ERVK-6Q9BXR3 956 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 GPR87Q9BY21 358 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 DRC3Q9H069 523 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 ILKAPQ9H0C8 392 aaPredicted RBP15.01□□□□□ -0.01
CPSF3-203ENST00000475482 SLCO1B3Q9NPD5 702 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 SOHLH2Q9NX45 425 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 SPHK1Q9NYA1 384 aa15.01□□□□□ -0.01
CPSF3-203ENST00000475482 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.01□□□□□ -0.01
CPSF3-203ENST00000475482 UBXN8O00124 270 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 KLK8O60259 260 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 CREG1O75629 220 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 PRKAR1AP10644 381 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 PVRP15151 417 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 UGT2B7P16662 529 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 CDKL1Q00532 357 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 GALNT1Q10472 559 aaPredicted RBP15□□□□□ -0.01
CPSF3-203ENST00000475482 NFATC3Q12968 1075 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 KCNAB2Q13303 367 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 PFKFB4Q16877 469 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 ATP1A1-AS1Q5TC04 95 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 PRAMEF17Q5VTA0 474 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 TTC23LQ6PF05 361 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 CYHR1Q6ZMK1 362 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 PIGWQ7Z7B1 504 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 TMEM126BQ8IUX1 230 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 PTGR2Q8N8N7 351 aaPredicted RBP15□□□□□ -0.01
CPSF3-203ENST00000475482 MCOLN3Q8TDD5 553 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 APOBEC4Q8WW27 367 aaKnown RBP15□□□□□ -0.01
CPSF3-203ENST00000475482 PHF21BQ96EK2 531 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 PARVBQ9HBI1 364 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 KLHL14Q9P2G3 628 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 KCNMB2Q9Y691 235 aa15□□□□□ -0.01
CPSF3-203ENST00000475482 PCM1Q15154 2024 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 CCDC88CQ9P219 2028 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 SLCO1B7G3V0H7 640 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 SNX3O60493 162 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 CATP04040 527 aaKnown RBP14.99□□□□□ -0.01
CPSF3-203ENST00000475482 ANXA5P08758 320 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 MTHFD2P13995 350 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 PEBP1P30086 187 aaKnown RBP14.99□□□□□ -0.01
CPSF3-203ENST00000475482 KCNC1P48547 511 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 AP1S2P56377 157 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 ZIC1Q15915 447 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 DEFB109BQ30KR1 87 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 ZNF678Q5SXM1 525 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 SULT1C3Q6IMI6 304 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 FAM199XQ6PEV8 388 aaPredicted RBP14.99□□□□□ -0.01
CPSF3-203ENST00000475482 SBSNQ6UWP8 590 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 UNC5DQ6UXZ4 953 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 UBE2R2Q712K3 238 aaPredicted RBP14.99□□□□□ -0.01
CPSF3-203ENST00000475482 DSELQ8IZU8 1212 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 LINC01555Q8NAE3 123 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 PDPRQ8NCN5 879 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 CCDC197Q8NCU1 140 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 PIWIL2Q8TC59 973 aaKnown RBP14.99□□□□□ -0.01
CPSF3-203ENST00000475482 ASB11Q8WXH4 323 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 TCTN2Q96GX1 697 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 EGFL8Q99944 293 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 RABEP2Q9H5N1 569 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 FANCEQ9HB96 536 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 FAM60AQ9NP50 221 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 STK38LQ9Y2H1 464 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 RAP2CQ9Y3L5 183 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 TENM4Q6N022 2769 aa14.99□□□□□ -0.01
CPSF3-203ENST00000475482 TMEM150CB9EJG8 249 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 GFYI3L273 518 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 J3QKU1 62 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 MEN1O00255 615 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 SUV39H1O43463 412 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 KDM1AO60341 852 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 KATNA1O75449 491 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 SUPT7LO94864 414 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 MATN4O95460 622 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 CAPN1P07384 714 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 RAB40ALP0C0E4 278 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 PTPN4P29074 926 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 PKLRP30613 574 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 HNMTP50135 292 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 RAB28P51157 221 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 ERV3-1Q14264 604 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 KIR2DS3Q14952 304 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 SETDB1Q15047 1291 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 PPP1R3AQ16821 1122 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 SLC5A12Q1EHB4 618 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 ZNF385CQ66K41 422 aaPredicted RBP14.98□□□□□ -0.01
CPSF3-203ENST00000475482 LCN10Q6JVE6 187 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 DCUN1D3Q8IWE4 304 aa14.98□□□□□ -0.01
CPSF3-203ENST00000475482 C19orf47Q8N9M1 422 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms