RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 H6PDO95479 791 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 ANXA4P09525 319 aaPredicted RBP9.44□□□□□ -0.9
USP39-214ENST00000474572 LAMP1P11279 417 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 MYCLP1P12525 358 aaPredicted RBP9.44□□□□□ -0.9
USP39-214ENST00000474572 PPIBP23284 216 aaKnown RBP9.44□□□□□ -0.9
USP39-214ENST00000474572 HPCAL1P37235 193 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 RPL3P39023 403 aaKnown RBP9.44□□□□□ -0.9
USP39-214ENST00000474572 CAPGP40121 348 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 RPL5P46777 297 aaKnown RBP9.44□□□□□ -0.9
USP39-214ENST00000474572 RPS9P46781 194 aaKnown RBP9.44□□□□□ -0.9
USP39-214ENST00000474572 GALK1P51570 392 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 ALDH3A2P51648 485 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 CTBSQ01459 385 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 ZNF763Q0D2J5 394 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 DDX39BQ13838 428 aaKnown RBP9.44□□□□□ -0.9
USP39-214ENST00000474572 DAG1Q14118 895 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 VEZF1Q14119 521 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 MYBPC3Q14896 1274 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 IRF4Q15306 451 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 HIST2H2ACQ16777 129 aaPredicted RBP9.44□□□□□ -0.9
USP39-214ENST00000474572 VMACQ2NL98 169 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 KCTD21Q4G0X4 260 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 ANXA8L1Q5VT79 327 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 HIST2H2AA3Q6FI13 130 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 DOK6Q6PKX4 331 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.44□□□□□ -0.9
USP39-214ENST00000474572 GCNT7Q6ZNI0 430 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 MTSS1LQ765P7 747 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 LPCAT2Q7L5N7 544 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 VN1R5Q7Z5H4 357 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 ANKRD46Q86W74 232 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 PTOV1Q86YD1 416 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 CHPFQ8IZ52 775 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 SYNPOQ8N3V7 929 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 SVOPLQ8N434 492 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 SPDYE1Q8NFV5 336 aaPredicted RBP9.44□□□□□ -0.9
USP39-214ENST00000474572 OR5AR1Q8NGP9 310 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 ZFP28Q8NHY6 868 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 ASB12Q8WXK4 309 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 NCSTNQ92542 709 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 TMBIM1Q969X1 311 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 FAM162AQ96A26 154 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 PANX1Q96RD7 426 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 PRPF18Q99633 342 aaKnown RBP9.44□□□□□ -0.9
USP39-214ENST00000474572 RPP25Q9BUL9 199 aaKnown RBP9.44□□□□□ -0.9
USP39-214ENST00000474572 PITHD1Q9GZP4 211 aaPredicted RBP9.44□□□□□ -0.9
USP39-214ENST00000474572 RBM38Q9H0Z9 239 aaKnown RBP9.44□□□□□ -0.9
USP39-214ENST00000474572 RHBGQ9H310 441 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 REEP4Q9H6H4 257 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 SLC28A3Q9HAS3 691 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 SMPD3Q9NY59 655 aaPredicted RBP9.44□□□□□ -0.9
USP39-214ENST00000474572 DNAJB9Q9UBS3 223 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 LIMD1Q9UGP4 676 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 ACSL5Q9ULC5 683 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 PLXND1Q9Y4D7 1925 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 TRPM6Q9BX84 2022 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 CHD9Q3L8U1 2897 aa9.44□□□□□ -0.9
USP39-214ENST00000474572 RNF103-CHMP3A0A140T963 221 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 A0A1W2PP55 124 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 A0A1W2PPV9 198 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 ANHXE9PGG2 379 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 PRKD3O94806 890 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 KCNK5O95279 499 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 TBX6O95947 436 aaPredicted RBP9.43□□□□□ -0.9
USP39-214ENST00000474572 CLPTM1O96005 669 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 GSNP06396 782 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 FURINP09958 794 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 ENGP17813 658 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 SERPINB1P30740 379 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 NTSR1P30989 418 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 SOX11P35716 441 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 IGFALSP35858 605 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 WASP42768 502 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 MTHFRP42898 656 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 ALDH3B2P48448 385 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 ARSFP54793 590 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 RPS21P63220 83 aaKnown RBP9.43□□□□□ -0.9
USP39-214ENST00000474572 TUBA4AP68366 448 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 PHEXP78562 749 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 PPP2R2BQ00005 443 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 REEP5Q00765 189 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 SF1Q15637 639 aaKnown RBP9.43□□□□□ -0.9
USP39-214ENST00000474572 HKDC1Q2TB90 917 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 CYBRD1Q53TN4 286 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 ZNF385BQ569K4 471 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 TMEM196Q5HYL7 178 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 FAM71E1Q6IPT2 247 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 CES5AQ6NT32 575 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 BORAQ6PGQ7 559 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 IYDQ6PHW0 289 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 TBPL2Q6SJ96 375 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 IKBIPQ70UQ0 350 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 COMMD6Q7Z4G1 85 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 CLECL1Q8IZS7 167 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 KRT78Q8N1N4 520 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 ZCCHC7Q8N3Z6 543 aaKnown RBP9.43□□□□□ -0.9
USP39-214ENST00000474572 DHRSXQ8N5I4 330 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 METTL25Q8N6Q8 603 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 ABHD11Q8NFV4 315 aa9.43□□□□□ -0.9
USP39-214ENST00000474572 PJA1Q8NG27 643 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms