RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 NXPE2Q96DL1 559 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 KLRG1Q96E93 195 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 FBXL20Q96IG2 436 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PBKQ96KB5 322 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 HBEGFQ99075 208 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 C7orf50Q9BRJ6 194 aaKnown RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 HTATIP2Q9BUP3 242 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PHF7Q9BWX1 381 aaPredicted RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 YTHDF1Q9BYJ9 559 aaKnown RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 EBF3Q9H4W6 596 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 UGT1A7Q9HAW7 530 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 UGT1A10Q9HAW8 530 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 UGT1A8Q9HAW9 530 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ING3Q9NXR8 418 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 TAS2R1Q9NYW7 299 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 DKK4Q9UBT3 224 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 MAGEL2Q9UJ55 1249 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 GOLT1BQ9Y3E0 138 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 GRIP1Q9Y3R0 1128 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PLEKHM1Q9Y4G2 1056 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 KCNE2Q9Y6J6 123 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 FBLL1A6NHQ2 334 aaKnown RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 CLCA1A8K7I4 914 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 A8MUI8 341 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ABCD4O14678 606 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PIP5K1BO14986 540 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 SURF4O15260 269 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 TAF5LO75529 589 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 LY86O95711 162 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 SNAI1O95863 264 aaPredicted RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 SRPRAP08240 638 aaKnown RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 RD3LP0DJH9 198 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PSMC3P17980 439 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 POU1F1P28069 291 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 IL12BP29460 328 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 MAS1LP35410 378 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 GGCXP38435 758 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 LSSP48449 732 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 TGM4P49221 684 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 KHKP50053 298 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 HK3P52790 923 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 MLF1P58340 268 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 TEKQ02763 1124 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ZFP36L1Q07352 338 aaKnown RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.37□□□□□ -1.87
UBR3-208ENST00000474426 TEFQ10587 303 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 POU4F2Q12837 409 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 CALCRLQ16602 461 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ZXDCQ2QGD7 858 aaPredicted RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 PAN3Q58A45 887 aaKnown RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 COLEC12Q5KU26 742 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 NKAIN2Q5VXU1 208 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 KIAA1211LQ6NV74 962 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 RPL13AP3Q6NVV1 102 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ZC3H14Q6PJT7 736 aaKnown RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 OTOP1Q7RTM1 612 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 LRRC70Q7Z2Q7 622 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 REC114Q7Z4M0 266 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 TFAP2DQ7Z6R9 452 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 FOXRED2Q8IWF2 684 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PI4KAP1Q8N8J0 262 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 POC5Q8NA72 575 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PAPD5Q8NDF8 572 aaKnown RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 OR13F1Q8NGS4 319 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 GPX8Q8TED1 209 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 SLC5A5Q92911 643 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 CPB2Q96IY4 423 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 ZNF583Q96ND8 569 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 DGAT2Q96PD7 388 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 FIZ1Q96SL8 496 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 AARSD1Q9BTE6 412 aaKnown RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 ZNF350Q9GZX5 532 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 SLA2Q9H6Q3 261 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 CSNK1G1Q9HCP0 422 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 VAPAQ9P0L0 249 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 GMPR2Q9P2T1 348 aaKnown RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 SMPXQ9UHP9 88 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 GPN3Q9UHW5 284 aaPredicted RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 FBXW2Q9UKT8 454 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 UGT2A1Q9Y4X1 527 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 LYVE1Q9Y5Y7 322 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 SPATA31A1Q5TZJ5 1347 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 SALL1Q9NSC2 1324 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 SPEF2Q9C093 1822 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 A0A0A6YYH2 397 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 CLEC18AA5D8T8 446 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 A6NJ64 397 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 KDM4EB2RXH2 506 aaPredicted RBP3.37□□□□□ -1.87
UBR3-208ENST00000474426 DCXO43602 365 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 WDR47O94967 919 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 MMP10P09238 476 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 SBK2P0C263 348 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 STAG3L1P0CL83 205 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 LCP1P13796 627 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 AREGP15514 252 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 PCMT1P22061 227 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 AKT2P31751 481 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 THBS4P35443 961 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 MMP12P39900 470 aa3.37□□□□□ -1.87
UBR3-208ENST00000474426 NAMPTP43490 491 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms