RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 SCTRP47872 440 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 CDH13P55290 713 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 GRM7Q14831 915 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 UNC50Q53HI1 259 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 ZNF678Q5SXM1 525 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 C6orf15Q6UXA7 325 aaPredicted RBP17.31■□□□□ 0.36
SNRPB-203ENST00000474384 KRT78Q8N1N4 520 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 CSNK1A1LQ8N752 337 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 ANKRD53Q8N9V6 530 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 TTC29Q8NA56 475 aaPredicted RBP17.31■□□□□ 0.36
SNRPB-203ENST00000474384 ZNF483Q8TF39 744 aaPredicted RBP17.31■□□□□ 0.36
SNRPB-203ENST00000474384 ATP6V1E2Q96A05 226 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 CLIP3Q96DZ5 547 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 CCDC126Q96EE4 140 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 WDR34Q96EX3 536 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 NAF1Q96HR8 494 aaKnown RBP17.31■□□□□ 0.36
SNRPB-203ENST00000474384 NDC1Q9BTX1 674 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 C1QTNF3Q9BXJ4 246 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 ZBTB26Q9HCK0 441 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 SEMA4BQ9NPR2 832 aaPredicted RBP17.31■□□□□ 0.36
SNRPB-203ENST00000474384 ENAMQ9NRM1 1142 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 COPG2Q9UBF2 871 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 ACTL7BQ9Y614 415 aa17.31■□□□□ 0.36
SNRPB-203ENST00000474384 IGF2RP11717 2491 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 HYKKA2RU49 373 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 FITM1A5D6W6 292 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.3■□□□□ 0.36
SNRPB-203ENST00000474384 OR7A17O14581 309 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 RAD1O60671 282 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 TSPAN8P19075 237 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 PCDH1Q08174 1060 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 GPS2Q13227 327 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 LAPTM5Q13571 262 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 TGIF1Q15583 401 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 TBCCQ15814 346 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 PRTGQ2VWP7 1150 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 TMIGD1Q6UXZ0 262 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 ASPGQ86U10 573 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 DTX1Q86Y01 620 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 SNIP1Q8TAD8 396 aaKnown RBP17.3■□□□□ 0.36
SNRPB-203ENST00000474384 PPP4R1Q8TF05 950 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 SLC13A3Q8WWT9 602 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 ZCCHC14Q8WYQ9 949 aaKnown RBP17.3■□□□□ 0.36
SNRPB-203ENST00000474384 TM4SF19Q96DZ7 209 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 L3HYPDHQ96EM0 354 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 EFCAB11Q9BUY7 163 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 ACTR8Q9H981 624 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 VIPAS39Q9H9C1 493 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 SSU72Q9NP77 194 aaKnown RBP17.3■□□□□ 0.36
SNRPB-203ENST00000474384 KCNK9Q9NPC2 374 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 OXSMQ9NWU1 459 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 DHCR7Q9UBM7 475 aaKnown RBP17.3■□□□□ 0.36
SNRPB-203ENST00000474384 ZFP69BQ9UJL9 534 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 MID2Q9UJV3 735 aa17.3■□□□□ 0.36
SNRPB-203ENST00000474384 ZNF490Q9ULM2 529 aaPredicted RBP17.3■□□□□ 0.36
SNRPB-203ENST00000474384 RUVBL1Q9Y265 456 aaKnown RBP17.3■□□□□ 0.36
SNRPB-203ENST00000474384 TAF4O00268 1085 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 PPP6CO00743 305 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 TXNDC9O14530 226 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 MED26O95402 600 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 SERPIND1P05546 499 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 HBQ1P09105 142 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 LIPCP11150 499 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 ALAS2P22557 587 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 AHRP35869 848 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 ARL1P40616 181 aaPredicted RBP17.29■□□□□ 0.36
SNRPB-203ENST00000474384 GCGRP47871 477 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 CCNG1P51959 295 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 ARSFP54793 590 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 MAGOHP61326 146 aaKnown RBP17.29■□□□□ 0.36
SNRPB-203ENST00000474384 E2F2Q14209 437 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 PCLAFQ15004 111 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 RBBP7Q16576 425 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 HIST2H2ACQ16777 129 aaPredicted RBP17.29■□□□□ 0.36
SNRPB-203ENST00000474384 FAM214AQ32MH5 1076 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 PAGE2BQ5JRK9 111 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 C1orf189Q5VU69 101 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 HIST2H2AA3Q6FI13 130 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 RHBDD2Q6NTF9 364 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 TTLL10Q6ZVT0 673 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 MYLK4Q86YV6 388 aaPredicted RBP17.29■□□□□ 0.36
SNRPB-203ENST00000474384 C10orf107Q8IVU9 208 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 NLGN4XQ8N0W4 816 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 CCNYL1Q8N7R7 359 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 CAMKVQ8NCB2 501 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 ZNF248Q8NDW4 579 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 NLGN4YQ8NFZ3 816 aaPredicted RBP17.29■□□□□ 0.36
SNRPB-203ENST00000474384 OR52B6Q8NGF0 335 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 TRPC4APQ8TEL6 797 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 NKD1Q969G9 470 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 ARL8AQ96BM9 186 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 TLCD1Q96CP7 247 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 CDK15Q96Q40 435 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 NLNQ9BYT8 704 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 NT5DC2Q9H857 520 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 AKIRIN1Q9H9L7 192 aaPredicted RBP17.29■□□□□ 0.36
SNRPB-203ENST00000474384 CUTCQ9NTM9 273 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 WDR70Q9NW82 654 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 NDOR1Q9UHB4 597 aa17.29■□□□□ 0.36
SNRPB-203ENST00000474384 SRPK3Q9UPE1 567 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms