RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CROCCP2Q86T23 111 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 ASPGQ86U10 573 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 TRABD2AQ86V40 505 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 CCDC63Q8NA47 563 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 MFSD9Q8NBP5 474 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 CAMKVQ8NCB2 501 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 ZNF740Q8NDX6 193 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 PROKR1Q8TCW9 393 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 HNRNPLLQ8WVV9 542 aaKnown RBP11.85□□□□□ -0.51
DDX56-209ENST00000473924 SLC13A3Q8WWT9 602 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 PTCD3Q96EY7 689 aaKnown RBP11.85□□□□□ -0.51
DDX56-209ENST00000473924 ZIM3Q96PE6 472 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 DPH2Q9BQC3 489 aaPredicted RBP11.85□□□□□ -0.51
DDX56-209ENST00000473924 EFHD1Q9BUP0 239 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 CENPHQ9H3R5 247 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 ARGLU1Q9NWB6 273 aaPredicted RBP11.85□□□□□ -0.51
DDX56-209ENST00000473924 CROTQ9UKG9 612 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 RUVBL1Q9Y265 456 aaKnown RBP11.85□□□□□ -0.51
DDX56-209ENST00000473924 PCDHGA4Q9Y5G9 962 aa11.85□□□□□ -0.51
DDX56-209ENST00000473924 TPRP12270 2363 aaKnown RBP11.85□□□□□ -0.51
DDX56-209ENST00000473924 SPTBP11277 2137 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 URB1O60287 2271 aaKnown RBP11.84□□□□□ -0.51
DDX56-209ENST00000473924 A0A1B0GX78 115 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 LRRC14BA6NHZ5 514 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 A8MT66 165 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 C9J4A7 227 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 DSCR3O14972 297 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 P2RX6O15547 441 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 NDUFS4O43181 175 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 CTIFO43310 598 aaKnown RBP11.84□□□□□ -0.51
DDX56-209ENST00000473924 SBK3P0C264 359 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 PIM1P11309 404 aaPredicted RBP11.84□□□□□ -0.51
DDX56-209ENST00000473924 LIFP15018 202 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 CRHR1P34998 444 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 TMPRSS3P57727 454 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 RPS15P62841 145 aaKnown RBP11.84□□□□□ -0.51
DDX56-209ENST00000473924 SLC18A2Q05940 514 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 CHIT1Q13231 466 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 GTF2H2Q13888 395 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 DOC2AQ14183 400 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 PRTGQ2VWP7 1150 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 CCDC153Q494R4 210 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 PAGE2BQ5JRK9 111 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 BEND6Q5SZJ8 279 aaPredicted RBP11.84□□□□□ -0.51
DDX56-209ENST00000473924 GTF2H2CQ6P1K8 395 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 METTL2BQ6P1Q9 378 aaKnown RBP11.84□□□□□ -0.51
DDX56-209ENST00000473924 TMIGD1Q6UXZ0 262 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 SH2D5Q6ZV89 423 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 GOLGA7Q7Z5G4 137 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 VN1R4Q7Z5H5 301 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 MYLK4Q86YV6 388 aaPredicted RBP11.84□□□□□ -0.51
DDX56-209ENST00000473924 IQCKQ8N0W5 287 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 TMEM151AQ8N4L1 468 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 ZSCAN1Q8NBB4 408 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 PPP4R1Q8TF05 950 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 CT55Q8WUE5 264 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 ATP6V1E2Q96A05 226 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 ZBTB9Q96C00 473 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 SMC6Q96SB8 1091 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 RUFY1Q96T51 708 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 MACROD1Q9BQ69 325 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 C17orf62Q9BQA9 187 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 EFCAB11Q9BUY7 163 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 SARGQ9BW04 601 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 CHST8Q9H2A9 424 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 SPNS1Q9H2V7 528 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 EHD1Q9H4M9 534 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 IPPKQ9H8X2 491 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 ACTR8Q9H981 624 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 SYNPO2LQ9H987 977 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 AKIRIN1Q9H9L7 192 aaPredicted RBP11.84□□□□□ -0.51
DDX56-209ENST00000473924 GEMIN8Q9NWZ8 242 aaKnown RBP11.84□□□□□ -0.51
DDX56-209ENST00000473924 IFT80Q9P2H3 777 aaPredicted RBP11.84□□□□□ -0.51
DDX56-209ENST00000473924 GPN3Q9UHW5 284 aaPredicted RBP11.84□□□□□ -0.51
DDX56-209ENST00000473924 ZFP69BQ9UJL9 534 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 KCND3Q9UK17 655 aa11.84□□□□□ -0.51
DDX56-209ENST00000473924 MDC1Q14676 2089 aaKnown RBP11.83□□□□□ -0.51
DDX56-209ENST00000473924 AHCTF1Q8WYP5 2266 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 ANKDD1BA6NHY2 528 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 C21orf140B9A014 251 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 E2F3O00716 465 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 DLX3O60479 287 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 MYZAPP0CAP1 466 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 MYL2P10916 166 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 EPORP19235 508 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 ATP5F1P24539 256 aaPredicted RBP11.83□□□□□ -0.52
DDX56-209ENST00000473924 AHRP35869 848 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 SCTRP47872 440 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 EMP3P54852 163 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 CYP4F2P78329 520 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 RGS1Q08116 209 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 SRSF6Q13247 344 aaKnown RBP11.83□□□□□ -0.52
DDX56-209ENST00000473924 LAPTM5Q13571 262 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 DNASE1L3Q13609 305 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 SLC9A5Q14940 896 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 NKAIN1Q4KMZ8 207 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 GARNL3Q5VVW2 1013 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 MLIPQ5VWP3 458 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 LRIG3Q6UXM1 1119 aa11.83□□□□□ -0.52
DDX56-209ENST00000473924 SLC22A9Q8IVM8 553 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms