RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 GRID1Q9ULK0 1009 aa14.43□□□□□ -0.1
SNX13-205ENST00000471744 CCDC88CQ9P219 2028 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 FREM2Q5SZK8 3169 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 LOC101059948A0A1B0GTJ6 334 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 COPEO14579 308 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 OR1F1O43749 312 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 RAB40ALP0C0E4 278 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 SLC35G6P0C7Q6 338 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 TCN2P20062 427 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 CRHR1P34998 444 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 DLSTP36957 453 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 BCL6P41182 706 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 CASP2P42575 452 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 SCTRP47872 440 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 AGTR2P50052 363 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 RPS15P62841 145 aaKnown RBP14.42□□□□□ -0.1
SNX13-205ENST00000471744 DCDP81605 110 aaKnown RBP14.42□□□□□ -0.1
SNX13-205ENST00000471744 NFKB2Q00653 900 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 MC1RQ01726 317 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 IRF8Q02556 426 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 DNASE1L3Q13609 305 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 PWP1Q13610 501 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 FAM53BQ14153 422 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 HIST2H2ACQ16777 129 aaPredicted RBP14.42□□□□□ -0.1
SNX13-205ENST00000471744 CCDC153Q494R4 210 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 FBXO48Q5FWF7 155 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 ZNF385CQ66K41 422 aaPredicted RBP14.42□□□□□ -0.1
SNX13-205ENST00000471744 HIST2H2AA3Q6FI13 130 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 PRMT9Q6P2P2 845 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 CCDC81Q6ZN84 652 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 SH2D5Q6ZV89 423 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 TTLL10Q6ZVT0 673 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 ASPGQ86U10 573 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 PLD3Q8IV08 490 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 SLC22A9Q8IVM8 553 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 PTGR2Q8N8N7 351 aaPredicted RBP14.42□□□□□ -0.1
SNX13-205ENST00000471744 TRPV3Q8NET8 790 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 HNRNPLLQ8WVV9 542 aaKnown RBP14.42□□□□□ -0.1
SNX13-205ENST00000471744 UBE2E3Q969T4 207 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 ESAMQ96AP7 390 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 WDR34Q96EX3 536 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 MS4A3Q96HJ5 214 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 NT5DC2Q9H857 520 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 TMEM216Q9P0N5 145 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 SENP1Q9P0U3 644 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 COPG2Q9UBF2 871 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 DHCR7Q9UBM7 475 aaKnown RBP14.42□□□□□ -0.1
SNX13-205ENST00000471744 ZFP69BQ9UJL9 534 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 CROTQ9UKG9 612 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 CDC14AQ9UNH5 594 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 RUVBL1Q9Y265 456 aaKnown RBP14.42□□□□□ -0.1
SNX13-205ENST00000471744 PCDHGA6Q9Y5G7 932 aa14.42□□□□□ -0.1
SNX13-205ENST00000471744 FEZF1A0PJY2 475 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 PRPF4O43172 522 aaKnown RBP eCLIP14.41□□□□□ -0.1
SNX13-205ENST00000471744 CTIFO43310 598 aaKnown RBP14.41□□□□□ -0.1
SNX13-205ENST00000471744 UGDHO60701 494 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 ONECUT2O95948 504 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 CTSBP07858 339 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 LIFP15018 202 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 KRT4P19013 534 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 ALAS2P22557 587 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 ITPKBP27987 946 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 HPDP32754 393 aaPredicted RBP14.41□□□□□ -0.1
SNX13-205ENST00000471744 MEF2AQ02078 507 aaPredicted RBP14.41□□□□□ -0.1
SNX13-205ENST00000471744 SLC18A2Q05940 514 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 RGS1Q08116 209 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 CHIT1Q13231 466 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 E2F2Q14209 437 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 KRT71Q3SY84 523 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 XKR6Q5GH73 641 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 NIPAL1Q6NVV3 410 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 LRIG3Q6UXM1 1119 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 TMIGD1Q6UXZ0 262 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 VN1R4Q7Z5H5 301 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 VASH2Q86V25 355 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 TRABD2AQ86V40 505 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 IQCKQ8N0W5 287 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 TEX9Q8N6V9 391 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 CT55Q8WUE5 264 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 SLC13A3Q8WWT9 602 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 TM4SF19Q96DZ7 209 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 CCDC126Q96EE4 140 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 PHF21BQ96EK2 531 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 SLC45A3Q96JT2 553 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 IQCGQ9H095 443 aaKnown RBP14.41□□□□□ -0.1
SNX13-205ENST00000471744 CHST8Q9H2A9 424 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 STARD5Q9NSY2 213 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 GEMIN8Q9NWZ8 242 aaKnown RBP14.41□□□□□ -0.1
SNX13-205ENST00000471744 MKS1Q9NXB0 559 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 NDOR1Q9UHB4 597 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 GPN3Q9UHW5 284 aaPredicted RBP14.41□□□□□ -0.1
SNX13-205ENST00000471744 MID2Q9UJV3 735 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 PADI2Q9Y2J8 665 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 SCN3AQ9NY46 2000 aa14.41□□□□□ -0.1
SNX13-205ENST00000471744 URADA6NGE7 173 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 ZNF891A8MT65 544 aaPredicted RBP14.4□□□□□ -0.1
SNX13-205ENST00000471744 A8MT66 165 aa14.4□□□□□ -0.1
SNX13-205ENST00000471744 TERTO14746 1132 aaKnown RBP14.4□□□□□ -0.1
SNX13-205ENST00000471744 LCMT2O60294 686 aaKnown RBP14.4□□□□□ -0.1
SNX13-205ENST00000471744 RECKO95980 971 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms