RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 POLEQ07864 2286 aa8.69□□□□□ -1.02
SF3A1-206ENST00000471037 ANKRD12Q6UB98 2062 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 IQCF5A8MTL0 148 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 H3BQF6 201 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 GOLGA8RI6L899 631 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 MASP2O00187 686 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 EIF3FO00303 357 aaPredicted RBP8.68□□□□□ -1.02
SF3A1-206ENST00000471037 E2F3O00716 465 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 COPEO14579 308 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 PRPF4O43172 522 aaKnown RBP eCLIP8.68□□□□□ -1.02
SF3A1-206ENST00000471037 PHGDHO43175 533 aaKnown RBP8.68□□□□□ -1.02
SF3A1-206ENST00000471037 GLRA3O75311 464 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 WISP3O95389 354 aaPredicted RBP8.68□□□□□ -1.02
SF3A1-206ENST00000471037 ONECUT2O95948 504 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 CTSBP07858 339 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 GSTA1P08263 222 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 CHRM5P08912 532 aaPredicted RBP8.68□□□□□ -1.02
SF3A1-206ENST00000471037 SLC35E2BP0CK96 405 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 TPBGLP0DKB5 382 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 ZNF37AP17032 561 aaPredicted RBP8.68□□□□□ -1.02
SF3A1-206ENST00000471037 MMP11P24347 488 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 ACADLP28330 430 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 TSFMP43897 325 aaKnown RBP8.68□□□□□ -1.02
SF3A1-206ENST00000471037 GLRBP48167 497 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 CCT5P48643 541 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 RGS4P49798 205 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 CLCN7P51798 805 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 SLC18A1P54219 525 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 TIAL1Q01085 375 aaKnown RBP eCLIP8.68□□□□□ -1.02
SF3A1-206ENST00000471037 SLC9A5Q14940 896 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 CYP2A13Q16696 494 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 SLC5A12Q1EHB4 618 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 TSNAXIP1Q2TAA8 658 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 B3GNTL1Q67FW5 361 aaPredicted RBP8.68□□□□□ -1.02
SF3A1-206ENST00000471037 LRRC8EQ6NSJ5 796 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 SH2D5Q6ZV89 423 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 OTOAQ7RTW8 1153 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 TBC1D21Q8IYX1 336 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 C4orf33Q8N1A6 199 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 DNAJC22Q8N4W6 341 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 NKAPQ8N5F7 415 aaKnown RBP8.68□□□□□ -1.02
SF3A1-206ENST00000471037 ZNF655Q8N720 491 aaPredicted RBP8.68□□□□□ -1.02
SF3A1-206ENST00000471037 BANPQ8N9N5 519 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 OR5AR1Q8NGP9 310 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 OR5K2Q8NHB8 316 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 CD200R1Q8TD46 325 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 FKBP10Q96AY3 582 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 APOPT1Q96IL0 206 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 GPR21Q99679 349 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 NDC1Q9BTX1 674 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 VPS11Q9H270 941 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 WDR54Q9H977 334 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 GPAMQ9HCL2 828 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 SLC22A11Q9NSA0 550 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 SPHK1Q9NYA1 384 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 DCDC2Q9UHG0 476 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 POLG2Q9UHN1 485 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 PLCL2Q9UPR0 1127 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 ENTPD4Q9Y227 616 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 ASF1AQ9Y294 204 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 NUP210LQ5VU65 1888 aa8.68□□□□□ -1.02
SF3A1-206ENST00000471037 A0A1B0GX78 115 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 SLC5A10A0PJK1 596 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 CCDC189A1A4V9 331 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 FOXO6A8MYZ6 492 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 TM9SF1O15321 606 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 TYROBPO43914 113 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 KDM1AO60341 852 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 ALBP02768 609 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 APOA4P06727 396 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 LTA4HP09960 611 aaKnown RBP8.67□□□□□ -1.02
SF3A1-206ENST00000471037 ENO3P13929 434 aaPredicted RBP8.67□□□□□ -1.02
SF3A1-206ENST00000471037 EDN3P14138 238 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 ITGAXP20702 1163 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 ITGA3P26006 1051 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 AOAHP28039 575 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 PEBP1P30086 187 aaKnown RBP8.67□□□□□ -1.02
SF3A1-206ENST00000471037 CCR7P32248 378 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 CRHR1P34998 444 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 LRBAP50851 2863 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 PER3P56645 1201 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 FOXL2P58012 376 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 IL2P60568 153 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 ATP6V0D1P61421 351 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 PLOD1Q02809 727 aaPredicted RBP8.67□□□□□ -1.02
SF3A1-206ENST00000471037 GBX1Q14549 363 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 ZNF460Q14592 562 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 KIR2DS3Q14952 304 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 FAM83EQ2M2I3 478 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 PRAMEF13Q5VWM6 474 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 KLC3Q6P597 504 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 PAQR3Q6TCH7 311 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 TMEM151BQ8IW70 566 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 KRT222Q8N1A0 295 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 ARFGAP2Q8N6H7 521 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 GIMAP7Q8NHV1 300 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 LKAAEAR1Q8TD35 194 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 DENND1AQ8TEH3 1009 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 ASZ1Q8WWH4 475 aa8.67□□□□□ -1.02
SF3A1-206ENST00000471037 ELMO1Q92556 727 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms