RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 TRAPPC9Q96Q05 1148 aa8.56□□□□□ -1.04
LMCD1-207ENST00000470776 AIF1LQ9BQI0 150 aa8.56□□□□□ -1.04
LMCD1-207ENST00000470776 ACPTQ9BZG2 426 aa8.56□□□□□ -1.04
LMCD1-207ENST00000470776 SPNS1Q9H2V7 528 aa8.56□□□□□ -1.04
LMCD1-207ENST00000470776 SRMSQ9H3Y6 488 aa8.56□□□□□ -1.04
LMCD1-207ENST00000470776 CAPN10Q9HC96 672 aa8.56□□□□□ -1.04
LMCD1-207ENST00000470776 SDR39U1Q9NRG7 319 aaPredicted RBP8.56□□□□□ -1.04
LMCD1-207ENST00000470776 AIG1Q9NVV5 245 aa8.56□□□□□ -1.04
LMCD1-207ENST00000470776 C1orf109Q9NX04 203 aa8.56□□□□□ -1.04
LMCD1-207ENST00000470776 SPHK1Q9NYA1 384 aa8.56□□□□□ -1.04
LMCD1-207ENST00000470776 ARMCX1Q9P291 453 aa8.56□□□□□ -1.04
LMCD1-207ENST00000470776 ANKMY1Q9P2S6 941 aa8.56□□□□□ -1.04
LMCD1-207ENST00000470776 SNX11Q9Y5W9 270 aa8.56□□□□□ -1.04
LMCD1-207ENST00000470776 COPG1Q9Y678 874 aaKnown RBP8.56□□□□□ -1.04
LMCD1-207ENST00000470776 TRBC2A0A5B9 178 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 LILRA5A6NI73 299 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 H0Y3Z8 333 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 ANKRD28O15084 1053 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 YKT6O15498 198 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 PEX1O43933 1283 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 IDO1P14902 403 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 PIK3R1P27986 724 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 PSMB5P28074 263 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 CMPK1P30085 196 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 ARRB1P49407 418 aaPredicted RBP8.55□□□□□ -1.04
LMCD1-207ENST00000470776 NEK2P51955 445 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 YBX1P67809 324 aaKnown RBP8.55□□□□□ -1.04
LMCD1-207ENST00000470776 HMGCS1Q01581 520 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 MAD2L1Q13257 205 aaPredicted RBP8.55□□□□□ -1.04
LMCD1-207ENST00000470776 NR1D2Q14995 579 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 ANGPT1Q15389 498 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 NR6A1Q15406 480 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 C14orf28Q4W4Y0 310 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 PDCD4Q53EL6 469 aaKnown RBP8.55□□□□□ -1.04
LMCD1-207ENST00000470776 C6orf132Q5T0Z8 1188 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 SLC23A3Q6PIS1 610 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 TMIGD1Q6UXZ0 262 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 RIPOR1Q6ZS17 1223 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 CEP68Q76N32 757 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 ZNF438Q7Z4V0 828 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 VN1R5Q7Z5H4 357 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 HUS1BQ8NHY5 278 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 RP9Q8TA86 221 aaKnown RBP8.55□□□□□ -1.04
LMCD1-207ENST00000470776 TSPEARQ8WU66 669 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 CHTF18Q8WVB6 975 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 PIGKQ92643 395 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 OR2A14Q96R47 310 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 PRRX2Q99811 253 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 THTPAQ9BU02 230 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 ACAT2Q9BWD1 397 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.55□□□□□ -1.04
LMCD1-207ENST00000470776 RAB33BQ9H082 229 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 Q9H521 79 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 LRTM1Q9HBL6 345 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 SLC6A20Q9NP91 592 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 MRPS30Q9NP92 439 aaKnown RBP8.55□□□□□ -1.04
LMCD1-207ENST00000470776 SLC52A3Q9NQ40 469 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 DMRT3Q9NQL9 472 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 CUEDC1Q9NWM3 386 aaPredicted RBP8.55□□□□□ -1.04
LMCD1-207ENST00000470776 UCKL1Q9NWZ5 548 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 ACTR10Q9NZ32 417 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 ZIM2Q9NZV7 527 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 VPS29Q9UBQ0 182 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 GIMAP2Q9UG22 337 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 SNX7Q9UNH6 387 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 DOLKQ9UPQ8 538 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 TMED5Q9Y3A6 229 aa8.55□□□□□ -1.04
LMCD1-207ENST00000470776 ZFC3H1O60293 1989 aaKnown RBP8.55□□□□□ -1.04
LMCD1-207ENST00000470776 KMT2EQ8IZD2 1858 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 OR2A25A4D2G3 310 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 OR5K3A6NET4 321 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 MAGEB17A8MXT2 336 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 C2orf74A8MZ97 194 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 ISM1B1AKI9 464 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 B4DGG1 531 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 H7BY64 318 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 PSMD12O00232 456 aaPredicted RBP8.54□□□□□ -1.04
LMCD1-207ENST00000470776 PPM1DO15297 605 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 GALR2O43603 387 aaPredicted RBP8.54□□□□□ -1.04
LMCD1-207ENST00000470776 CLEC3AO75596 197 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 KRT36O76013 467 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 SEMA3DO95025 777 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 TBX6O95947 436 aaPredicted RBP8.54□□□□□ -1.04
LMCD1-207ENST00000470776 PRPS2P11908 318 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 ANPEPP15144 967 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 AMD1P17707 334 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 PTX3P26022 381 aaPredicted RBP8.54□□□□□ -1.04
LMCD1-207ENST00000470776 EPHA8P29322 1005 aaPredicted RBP8.54□□□□□ -1.04
LMCD1-207ENST00000470776 CPOXP36551 454 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 ZFP36L2P47974 494 aaKnown RBP8.54□□□□□ -1.04
LMCD1-207ENST00000470776 ARFIP1P53367 373 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 EPHA4P54764 986 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 DIO3P55073 304 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 MAZP56270 477 aaKnown RBP8.54□□□□□ -1.04
LMCD1-207ENST00000470776 TBL3Q12788 808 aaKnown RBP8.54□□□□□ -1.04
LMCD1-207ENST00000470776 BNIP3Q12983 259 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 CUL3Q13618 768 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 TSTA3Q13630 321 aaPredicted RBP8.54□□□□□ -1.04
LMCD1-207ENST00000470776 MAPRE2Q15555 327 aa8.54□□□□□ -1.04
LMCD1-207ENST00000470776 TCEA2Q15560 299 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms