RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 VEGFDO43915 354 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 MAGEC1O60732 1142 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 GLRA3O75311 464 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 AP2A2O94973 939 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 KLHL2O95198 593 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 GUCA1CO95843 209 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 IGLV3-19P01714 112 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 WNT1P04628 370 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 AMY1AP04745 511 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 APOA4P06727 396 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 SP9P0CG40 484 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 SLC35E2BP0CK96 405 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 ACP5P13686 325 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 CTSEP14091 401 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 NCF1P14598 390 aaPredicted RBP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 CD1DP15813 335 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 CHN1P15882 459 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 TFEBP19484 476 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 NR1D1P20393 614 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 DDCP20711 480 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 FPR1P21462 350 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 KELP23276 732 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 RPS3P23396 243 aaKnown RBP eCLIP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 DGKAP23743 735 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 CD27P26842 260 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 AK4P27144 223 aaPredicted RBP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 CD38P28907 300 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 PDHA2P29803 388 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 CCR7P32248 378 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 TRIM23P36406 574 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 SKIV2L2P42285 1042 aaKnown RBP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 RABIFP47224 123 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 CSNK1EP49674 416 aaKnown RBP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 RGS4P49798 205 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 C21orf59P57076 290 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 SRP54P61011 504 aaKnown RBP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 CBX1P83916 185 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 ARHGAP8P85298 464 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 TIAL1Q01085 375 aaKnown RBP eCLIP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 SLC18A2Q05940 514 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 SF3A3Q12874 501 aaKnown RBP eCLIP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 DLG1Q12959 904 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 TARDBPQ13148 414 aaKnown RBP eCLIP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 DNAJC3Q13217 504 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 C1orf61Q13536 156 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 SIM2Q14190 667 aaPredicted RBP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 PTK2BQ14289 1009 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 NFE2L1Q14494 772 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 NFATC4Q14934 902 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 RAB39AQ14964 217 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 RASA2Q15283 850 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 ANGPT1Q15389 498 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 INSCQ1MX18 579 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 FAM83EQ2M2I3 478 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 PGS1Q32NB8 556 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 TTLL9Q3SXZ7 439 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 FBXO48Q5FWF7 155 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 WDR45BQ5MNZ6 344 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 TPRG1LQ5T0D9 272 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 THEMIS2Q5TEJ8 643 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 AGAP9Q5VTM2 703 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 ZNF585AQ6P3V2 769 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 KLC3Q6P597 504 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 LVRNQ6Q4G3 990 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 MACC1Q6ZN28 852 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 GCNT7Q6ZNI0 430 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 FAM83HQ6ZRV2 1179 aaPredicted RBP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 CDHR3Q6ZTQ4 885 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 SH2D5Q6ZV89 423 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 PIWIL4Q7Z3Z4 852 aaKnown RBP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 GALNT7Q86SF2 657 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 LRRTM4Q86VH4 590 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 AMZ2Q86W34 360 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 GALNT13Q8IUC8 556 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 VRK3Q8IV63 474 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 MYO1HQ8N1T3 1032 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 ZNF808Q8N4W9 903 aaPredicted RBP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 NKAPQ8N5F7 415 aaKnown RBP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 ARFGAP2Q8N6H7 521 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 BANPQ8N9N5 519 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 CADM4Q8NFZ8 388 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 OR56A4Q8NGH8 313 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 DTX3LQ8TDB6 740 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 ACMSDQ8TDX5 336 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 OR1E3Q8WZA6 343 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 PIGKQ92643 395 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 TMEM159Q96B96 161 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 CLIP3Q96DZ5 547 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 MVB12AQ96EY5 273 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 COX14Q96I36 57 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 APOPT1Q96IL0 206 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 CABS1Q96KC9 395 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 PKNOX2Q96KN3 472 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 FAM111AQ96PZ2 611 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 C19orf43Q9BQ61 176 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 CPPED1Q9BRF8 314 aaPredicted RBP3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 KRTAP9-3Q9BYQ3 159 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 OSGEPL1Q9H4B0 414 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 ALG9Q9H6U8 611 aa3.97□□□□□ -1.77
TMEM39A-204ENST00000468545 NMRAL1Q9HBL8 299 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms