RNA–Protein interactions for RNA: ENST00000466832.5

TRA2B-209, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-209ENST00000466832 VPS35Q96QK1 796 aa5.6□□□□□ -1.51
TRA2B-209ENST00000466832 CGREF1Q99674 301 aa5.6□□□□□ -1.51
TRA2B-209ENST00000466832 ZFYVE21Q9BQ24 234 aa5.6□□□□□ -1.51
TRA2B-209ENST00000466832 TMEM79Q9BSE2 394 aa5.6□□□□□ -1.51
TRA2B-209ENST00000466832 CIPCQ9C0C6 399 aa5.6□□□□□ -1.51
TRA2B-209ENST00000466832 ASB8Q9H765 288 aa5.6□□□□□ -1.51
TRA2B-209ENST00000466832 RMND5AQ9H871 391 aa5.6□□□□□ -1.51
TRA2B-209ENST00000466832 NOL11Q9H8H0 719 aaKnown RBP5.6□□□□□ -1.51
TRA2B-209ENST00000466832 NANOGQ9H9S0 305 aa5.6□□□□□ -1.51
TRA2B-209ENST00000466832 FBRSL1Q9HCM7 1045 aaKnown RBP5.6□□□□□ -1.51
TRA2B-209ENST00000466832 IL26Q9NPH9 171 aa5.6□□□□□ -1.51
TRA2B-209ENST00000466832 SEMA4GQ9NTN9 838 aa5.6□□□□□ -1.51
TRA2B-209ENST00000466832 DDX18Q9NVP1 670 aaKnown RBP5.6□□□□□ -1.51
TRA2B-209ENST00000466832 C1orf109Q9NX04 203 aa5.6□□□□□ -1.51
TRA2B-209ENST00000466832 DUS2Q9NX74 493 aaKnown RBP5.6□□□□□ -1.51
TRA2B-209ENST00000466832 TMEM9Q9P0T7 183 aa5.6□□□□□ -1.51
TRA2B-209ENST00000466832 SNX6Q9UNH7 406 aa5.6□□□□□ -1.51
TRA2B-209ENST00000466832 TSC22D4Q9Y3Q8 395 aa5.6□□□□□ -1.51
TRA2B-209ENST00000466832 CPQQ9Y646 472 aa5.6□□□□□ -1.51
TRA2B-209ENST00000466832 KCNE1BA0A087WTH5 132 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 C1orf232A0A0U1RR37 186 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 ZNF839A8K0R7 811 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 MANBAO00462 879 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 SLC9A3R1O14745 358 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-209ENST00000466832 WNT9AO14904 365 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 TAPBPO15533 448 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 OR1I1O60431 355 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 ZNF821O75541 412 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-209ENST00000466832 CLDN9O95484 217 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 LRG1P02750 347 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 SRPRAP08240 638 aaKnown RBP5.59□□□□□ -1.51
TRA2B-209ENST00000466832 PIRTP0C851 137 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 ZCCHC18P0CG32 403 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 VSIG8P0DPA2 414 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 AOAHP28039 575 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 HNF1BP35680 557 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 CAPGP40121 348 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 RXRGP48443 463 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 CDK9P50750 372 aaKnown RBP5.59□□□□□ -1.51
TRA2B-209ENST00000466832 CLDN8P56748 225 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 GABARAPL2P60520 117 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 RALGDSQ12967 914 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 TOP3AQ13472 1001 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-209ENST00000466832 RBBP5Q15291 538 aaKnown RBP5.59□□□□□ -1.51
TRA2B-209ENST00000466832 FAM98BQ52LJ0 330 aaKnown RBP5.59□□□□□ -1.51
TRA2B-209ENST00000466832 CARD16Q5EG05 197 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 RNFT1Q5M7Z0 435 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 LIPJQ5W064 366 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 ERICH5Q6P6B1 374 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 DHRS4L2Q6PKH6 230 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 NPAS3Q8IXF0 933 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 FNDC5Q8NAU1 212 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 GALNT6Q8NCL4 622 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 TSPAN14Q8NG11 270 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 OR4F6Q8NGB9 312 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 CSGALNACT1Q8TDX6 532 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 CANT1Q8WVQ1 401 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 ATL1Q8WXF7 558 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 LZICQ8WZA0 190 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 FBXL8Q96CD0 374 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 EID2BQ96D98 161 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 CXorf40BQ96DE9 158 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 RNF145Q96MT1 663 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 KCNA7Q96RP8 456 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 COPS8Q99627 209 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 BCL7BQ9BQE9 202 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 UNKQ9C0B0 810 aaKnown RBP5.59□□□□□ -1.51
TRA2B-209ENST00000466832 GABARAPL1Q9H0R8 117 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 PCDHAC1Q9H158 963 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 IPPKQ9H8X2 491 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 PARVBQ9HBI1 364 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 ACSS2Q9NR19 701 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 GKN1Q9NS71 199 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 SMPD4Q9NXE4 827 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 SMPD3Q9NY59 655 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-209ENST00000466832 WWOXQ9NZC7 414 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 GPRC5BQ9NZH0 403 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 GALPQ9UBC7 116 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 BTRCQ9Y297 605 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 GPR55Q9Y2T6 319 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-209ENST00000466832 ANGPTL3Q9Y5C1 460 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 ATP6AP2A0A1C7CYW4 349 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 C7orf72A4D263 438 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 NT5C1B-RDH14C9J2C7 533 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 GFYI3L273 518 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 ACOX3O15254 700 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 TSPAN3O60637 253 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 STK16O75716 305 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 ATP6AP2O75787 350 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 PRKD3O94806 890 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 SLC25A14O95258 325 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-209ENST00000466832 FTH1P02794 183 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 PRB1P04280 392 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 HNRNPA1P09651 372 aaKnown RBP eCLIP5.59□□□□□ -1.51
TRA2B-209ENST00000466832 IRF1P10914 325 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 SRCP12931 536 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 JUNBP17275 347 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-209ENST00000466832 HOXB9P17482 250 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-209ENST00000466832 CYP2A7P20853 494 aa5.59□□□□□ -1.51
TRA2B-209ENST00000466832 PPIBP23284 216 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms