RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 VEZF1Q14119 521 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 DOC2BQ14184 412 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 IRF3Q14653 427 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 NANOGNBQ7Z5D8 188 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 LINC01599Q8WXQ3 324 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 MAL2Q969L2 176 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 COL21A1Q96P44 957 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 TM6SF2Q9BZW4 377 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 RAPGEFL1Q9UHV5 662 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 PCDHGA2Q9Y5H1 932 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 COCHO43405 550 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 GCM2O75603 506 aaPredicted RBP12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 SNX4O95219 450 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 IDH2P48735 452 aaKnown RBP12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 CDKN3Q16667 212 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 FBXO43Q4G163 708 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 LRRC70Q7Z2Q7 622 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 CCDC190Q86UF4 302 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 SYT12Q8IV01 421 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 L3MBTL4Q8NA19 623 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 OR6F1Q8NGZ6 308 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 FCRL1Q96LA6 429 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 HTATIP2Q9BUP3 242 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 RUBCNLQ9H714 662 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 CWH43Q9H720 699 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 MARCH7Q9H992 704 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 TPT1P8Q9HAU6 139 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 C14orf119Q9NWQ9 140 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 SLC6A14Q9UN76 642 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 N6AMT1Q9Y5N5 214 aa12.55□□□□□ -0.4
PDZRN3-205ENST00000466780 GLYATL1P3A0A0U1RQE8 302 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 A8MX80 341 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 IRF1P10914 325 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 LAMP1P11279 417 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 TNFRSF1BP20333 461 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 AOAHP28039 575 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 GKP32189 559 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 ST3GAL4Q11206 333 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 SF1Q15637 639 aaKnown RBP12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 PTCHD3Q3KNS1 767 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 C10orf62Q5T681 223 aaPredicted RBP12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 RAVER1Q8IY67 606 aaKnown RBP12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 NUAK2Q9H093 628 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 NDUFAF4Q9P032 175 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 PADI2Q9Y2J8 665 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 ANKRD34BA5PLL1 514 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 H3BQ06 376 aaPredicted RBP12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 TNFRSF11BO00300 401 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 CTDSP2O14595 271 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 ZW10O43264 779 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 SUV39H1O43463 412 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 KIAA0513O60268 411 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 HSMCR30P0CW71 290 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 COX7A2P14406 83 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 CCR7P32248 378 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 PIK3CBP42338 1070 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 SLC6A12P48065 614 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 FLT3LGP49771 235 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 SRSF11Q05519 484 aaKnown RBP12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 PPIGQ13427 754 aaKnown RBP eCLIP12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 NXNL2Q5VZ03 156 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 FRG2Q64ET8 278 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 UBE2R2Q712K3 238 aaPredicted RBP12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 VASH1Q7L8A9 365 aaPredicted RBP12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 NXPE1Q8N323 547 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 TCAIMQ8N3R3 496 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 STX19Q8N4C7 294 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 SH3KBP1Q96B97 665 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 FRG2BQ96QU4 278 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 NIPSNAP1Q9BPW8 284 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 TTLL2Q9BWV7 592 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 KCTD5Q9NXV2 234 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 MKLN1Q9UL63 735 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 TBC1D24Q9ULP9 559 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 FZD4Q9ULV1 537 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 PCDHB11Q9Y5F2 797 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 FRMPD3Q5JV73 1810 aa12.54□□□□□ -0.4
PDZRN3-205ENST00000466780 AP3D1O14617 1153 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 SEPT4O43236 478 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 TRBC1P01850 177 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 ACPPP15309 386 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 HNF1BP35680 557 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 HTR3AP46098 478 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 OR2B6P58173 313 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 DEFA1P59665 94 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 DEFA3P59666 94 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 SEMG2Q02383 582 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 KRR1Q13601 381 aaKnown RBP12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 TP53BP2Q13625 1128 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 TRIM71Q2Q1W2 868 aaKnown RBP12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 ATAD3CQ5T2N8 411 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 ADGRF1Q5T601 910 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 OR10G2Q8NGC3 310 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 OR8J2Q8NGG1 315 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 LILRB4Q8NHJ6 448 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 CDC26Q8NHZ8 85 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 CSGALNACT1Q8TDX6 532 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 FAM193BQ96PV7 902 aaPredicted RBP12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 OR5M11Q96RB7 305 aa12.53□□□□□ -0.4
PDZRN3-205ENST00000466780 DOHHQ9BU89 302 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms