RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 MTFMTQ96DP5 389 aaKnown RBP19.08■□□□□ 0.64
SDF4-205ENST00000465727 MYEOVQ96EZ4 313 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 EXOC2Q96KP1 924 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 DOHHQ9BU89 302 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 TAPBPLQ9BX59 468 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 ELOVL6Q9H5J4 265 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 IMPAD1Q9NX62 359 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 IL17CQ9P0M4 197 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 ENOPH1Q9UHY7 261 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 CORO2BQ9UQ03 480 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 PCDHGC4Q9Y5F7 938 aa19.08■□□□□ 0.64
SDF4-205ENST00000465727 SCAMP3O14828 347 aaKnown RBP19.07■□□□□ 0.64
SDF4-205ENST00000465727 MPZL2O60487 215 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 ZNF623O75123 536 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 MYCP01106 439 aaPredicted RBP19.07■□□□□ 0.64
SDF4-205ENST00000465727 HMBSP08397 361 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 OR4Q2P0C623 313 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 MLLT3P42568 568 aaPredicted RBP19.07■□□□□ 0.64
SDF4-205ENST00000465727 P2RX3P56373 397 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 CYP4F2P78329 520 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 SCN1BQ07699 218 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 ASAH1Q13510 395 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 TSTQ16762 297 aaKnown RBP19.07■□□□□ 0.64
SDF4-205ENST00000465727 C10orf120Q5SQS8 335 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 SDHAF4Q5VUM1 108 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 MOB2Q70IA6 237 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 B3GNT7Q8NFL0 401 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 ZFYVE19Q96K21 471 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 RACGAP1Q9H0H5 632 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 SLC32A1Q9H598 525 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 ACOXLQ9NUZ1 547 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 PLXNA4Q9HCM2 1894 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 CRYZL1O95825 349 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 COL6A1P12109 1028 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 MED22Q15528 200 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 HKDC1Q2TB90 917 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 SYCE2Q6PIF2 218 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 ZNF621Q6ZSS3 439 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 SUN5Q8TC36 379 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 ASB15Q8WXK1 588 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 CCM2Q9BSQ5 444 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 TSEN34Q9BSV6 310 aaKnown RBP19.07■□□□□ 0.64
SDF4-205ENST00000465727 SRRQ9GZT4 340 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 GPBP1L1Q9HC44 474 aaPredicted RBP19.07■□□□□ 0.64
SDF4-205ENST00000465727 DIABLOQ9NR28 239 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 SNX7Q9UNH6 387 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 DUSP12Q9UNI6 340 aa19.07■□□□□ 0.64
SDF4-205ENST00000465727 PCNTO95613 3336 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 SERTM1A2A2V5 107 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 RGS5O15539 181 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 F11P03951 625 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 ABCB1P08183 1280 aaPredicted RBP19.06■□□□□ 0.64
SDF4-205ENST00000465727 ANXA5P08758 320 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 PPIBP23284 216 aaKnown RBP19.06■□□□□ 0.64
SDF4-205ENST00000465727 RORCP51449 518 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 CRISP3P54108 245 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 SLAMF1Q13291 335 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 TEAD4Q15561 434 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 LRRC66Q68CR7 880 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 LIX1LQ8IVB5 337 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 PEX5LQ8IYB4 626 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 CACTIN-AS1Q8N1I8 211 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 ZBTB2Q8N680 514 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 SLC5A8Q8N695 610 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 OR8J2Q8NGG1 315 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 FBXO32Q969P5 355 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 SPON2Q9BUD6 331 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 PLSCR3Q9NRY6 295 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 MS4A12Q9NXJ0 267 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 BOLA1Q9Y3E2 137 aa19.06■□□□□ 0.64
SDF4-205ENST00000465727 CCDC182A6NF36 153 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 A8MV72 311 aaPredicted RBP19.05■□□□□ 0.64
SDF4-205ENST00000465727 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.05■□□□□ 0.64
SDF4-205ENST00000465727 EIF3FO00303 357 aaPredicted RBP19.05■□□□□ 0.64
SDF4-205ENST00000465727 LRATO95237 230 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 SLC25A14O95258 325 aaPredicted RBP19.05■□□□□ 0.64
SDF4-205ENST00000465727 HMGCLP35914 325 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 CDC42P60953 191 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 TRIM69Q86WT6 500 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 FAM181AQ8N9Y4 354 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 DPH2Q9BQC3 489 aaPredicted RBP19.05■□□□□ 0.64
SDF4-205ENST00000465727 ASPNQ9BXN1 380 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 IRF2BPLQ9H1B7 796 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 TMEM245Q9H330 911 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 MUTYHQ9UIF7 546 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 KLHL20Q9Y2M5 609 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 PCDHB11Q9Y5F2 797 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 CFAP20Q9Y6A4 193 aaKnown RBP19.05■□□□□ 0.64
SDF4-205ENST00000465727 NT5C1B-RDH14C9J2C7 533 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 GPR39O43194 453 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 SCN2BO60939 215 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 ALPPP05187 535 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 PIPP12273 146 aaPredicted RBP19.05■□□□□ 0.64
SDF4-205ENST00000465727 AMD1P17707 334 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 ENDOUP21128 410 aaKnown RBP19.05■□□□□ 0.64
SDF4-205ENST00000465727 ERP29P30040 261 aaKnown RBP19.05■□□□□ 0.64
SDF4-205ENST00000465727 GPR15P49685 360 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 CDH4P55283 916 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 PSPHP78330 225 aa19.05■□□□□ 0.64
SDF4-205ENST00000465727 RUNX1T1Q06455 604 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms